# HG changeset patch
# User iuc
# Date 1556275384 14400
# Node ID 283cad9e4ad689aef6af43064bc4324b5ad0249f
# Parent  d154930a5dbe7293ddcc40216d99d08650e21057
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 3e20977cfa8882c231128158827bbc85a770a371

diff -r d154930a5dbe -r 283cad9e4ad6 repository_dependencies.xml
--- a/repository_dependencies.xml	Wed Oct 17 12:55:26 2018 -0400
+++ b/repository_dependencies.xml	Fri Apr 26 06:43:04 2019 -0400
@@ -1,14 +1,15 @@
-<?xml version="1.0"?>
-<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">  <repository changeset_revision="5292cd52d594" name="trinity_contig_exn50_statistic" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fc8249b4d3c1" name="trinity" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e8787d4926f5" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f92fdfb0563c" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a6c46c5d7b05" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="22424d8afd59" name="describe_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fb67680bc685" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="48165deb2c73" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="561fac409093" name="trinity_super_transcripts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="80c0606ee5bd" name="trinity_define_clusters_by_cutting_tree" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="95bd9fc6b609" name="trinity_run_de_analysis" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="67c1e709eef3" name="trinity_samples_qccheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-</repositories>
+<?xml version="1.0" ?>
+<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">
+    <repository changeset_revision="5292cd52d594" name="trinity_contig_exn50_statistic" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="fc8249b4d3c1" name="trinity" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="e8787d4926f5" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="a66bc159f816" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="a6c46c5d7b05" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="22424d8afd59" name="describe_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="fb67680bc685" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="48165deb2c73" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="561fac409093" name="trinity_super_transcripts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="808cfc0d9465" name="trinity_define_clusters_by_cutting_tree" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="95bd9fc6b609" name="trinity_run_de_analysis" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="67c1e709eef3" name="trinity_samples_qccheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+</repositories>
\ No newline at end of file