# HG changeset patch
# User iuc
# Date 1770922039 0
# Node ID 7acbbc4ffdd70ed8d375649eb6f04a72f787b7f6
# Parent  db83c344b20a2ae027fc7dae69d85cbc46283b78
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/haltools commit 6ecdc1e0a380a42b6ac8f49b4f4eca5d068ccc9e

diff -r db83c344b20a -r 7acbbc4ffdd7 repository_dependencies.xml
--- a/repository_dependencies.xml	Mon Feb 09 09:38:01 2026 +0000
+++ b/repository_dependencies.xml	Thu Feb 12 18:47:19 2026 +0000
@@ -1,31 +1,31 @@
 <?xml version="1.0" ?>
 <repositories description="A set of tools to for manipulating HAL alignment files">
-    <repository owner="iuc" name="hal_hallodextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b95d65e23448"/>
-    <repository owner="iuc" name="hal_halliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="47c9d418a896"/>
-    <repository owner="iuc" name="hal_halpctid" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="fcc762afb884"/>
-    <repository owner="iuc" name="hal_halmaskextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="31871c901fe2"/>
-    <repository owner="iuc" name="hal_halrenamegenomes" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eb6ae9bf353d"/>
-    <repository owner="iuc" name="hal_haladdtobranch" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8d69e6b4aad3"/>
+    <repository owner="iuc" name="hal_halremovegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f5f265415faa"/>
+    <repository owner="iuc" name="hal_halwiggleliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="adc99beaf7d7"/>
     <repository owner="iuc" name="hal_hal2fasta" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="90503ee992eb"/>
-    <repository owner="iuc" name="hal_halsummarizemutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="daef75c08ab4"/>
-    <repository owner="iuc" name="hal_halvalidate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="13917eec61b1"/>
     <repository owner="iuc" name="hal_halextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ea84fd77a2d2"/>
-    <repository owner="iuc" name="hal_halindels" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e76cf92f5f72"/>
-    <repository owner="iuc" name="hal_halsnps" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="116020f2c8f3"/>
-    <repository owner="iuc" name="hal_halbranchmutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a84e089a22f8"/>
+    <repository owner="iuc" name="hal_halstats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25dcde5bf94e"/>
+    <repository owner="iuc" name="hal_halmaskextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="31871c901fe2"/>
+    <repository owner="iuc" name="hal_hallodextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b95d65e23448"/>
+    <repository owner="iuc" name="hal_halupdatebranchlengths" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8f8634a2320b"/>
+    <repository owner="iuc" name="hal_halcoverage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48d453b8f39d"/>
+    <repository owner="iuc" name="hal_halrenamesequences" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4dd28ce079d0"/>
+    <repository owner="iuc" name="hal_hal2paf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9951a0cc9a11"/>
+    <repository owner="iuc" name="hal_maf2hal" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2900728b299a"/>
+    <repository owner="iuc" name="hal_halalignedextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4638a5ff6186"/>
     <repository owner="iuc" name="hal_halalignmentdepth" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25489f7c4cff"/>
     <repository owner="iuc" name="hal_halremovesubtree" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="19f3c5cad8ae"/>
+    <repository owner="iuc" name="hal_hal2vg" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cb1771706300"/>
+    <repository owner="iuc" name="hal_hal2maf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a3ff8225d554"/>
+    <repository owner="iuc" name="hal_halvalidate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="13917eec61b1"/>
+    <repository owner="iuc" name="hal_halindels" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e76cf92f5f72"/>
+    <repository owner="iuc" name="hal_halbranchmutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a84e089a22f8"/>
+    <repository owner="iuc" name="hal_halliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="47c9d418a896"/>
+    <repository owner="iuc" name="hal_haladdtobranch" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="020607b4f91c"/>
     <repository owner="iuc" name="hal_halreplacegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="de9294f0826f"/>
-    <repository owner="iuc" name="hal_halalignedextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4638a5ff6186"/>
-    <repository owner="iuc" name="hal_halwiggleliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="adc99beaf7d7"/>
-    <repository owner="iuc" name="hal_maf2hal" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2900728b299a"/>
-    <repository owner="iuc" name="hal_hal2vg" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cb1771706300"/>
-    <repository owner="iuc" name="hal_halrenamesequences" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4dd28ce079d0"/>
-    <repository owner="iuc" name="hal_halremovegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f5f265415faa"/>
-    <repository owner="iuc" name="hal_hal2paf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9951a0cc9a11"/>
-    <repository owner="iuc" name="hal_hal2maf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a3ff8225d554"/>
+    <repository owner="iuc" name="hal_halsummarizemutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="daef75c08ab4"/>
     <repository owner="iuc" name="hal_halsynteny" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f73497c76366"/>
-    <repository owner="iuc" name="hal_halupdatebranchlengths" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8f8634a2320b"/>
-    <repository owner="iuc" name="hal_halcoverage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48d453b8f39d"/>
-    <repository owner="iuc" name="hal_halstats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25dcde5bf94e"/>
+    <repository owner="iuc" name="hal_halrenamegenomes" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eb6ae9bf353d"/>
+    <repository owner="iuc" name="hal_halpctid" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="fcc762afb884"/>
+    <repository owner="iuc" name="hal_halsnps" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="116020f2c8f3"/>
 </repositories>
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