Mercurial > repos > iuc > suite_haltools

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/haltools commit 6ecdc1e0a380a42b6ac8f49b4f4eca5d068ccc9e
author iuc
date Thu, 12 Feb 2026 18:47:19 +0000
parents db83c344b20a
children
comparison
equal deleted inserted replaced
1:db83c344b20a 2:7acbbc4ffdd7
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="A set of tools to for manipulating HAL alignment files"> 2 <repositories description="A set of tools to for manipulating HAL alignment files">
3 <repository owner="iuc" name="hal_halremovegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f5f265415faa"/>
4 <repository owner="iuc" name="hal_halwiggleliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="adc99beaf7d7"/>
5 <repository owner="iuc" name="hal_hal2fasta" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="90503ee992eb"/>
6 <repository owner="iuc" name="hal_halextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ea84fd77a2d2"/>
7 <repository owner="iuc" name="hal_halstats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25dcde5bf94e"/>
8 <repository owner="iuc" name="hal_halmaskextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="31871c901fe2"/>
3 <repository owner="iuc" name="hal_hallodextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b95d65e23448"/> 9 <repository owner="iuc" name="hal_hallodextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b95d65e23448"/>
4 <repository owner="iuc" name="hal_halliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="47c9d418a896"/> 10 <repository owner="iuc" name="hal_halupdatebranchlengths" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8f8634a2320b"/>
5 <repository owner="iuc" name="hal_halpctid" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="fcc762afb884"/> 11 <repository owner="iuc" name="hal_halcoverage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48d453b8f39d"/>
6 <repository owner="iuc" name="hal_halmaskextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="31871c901fe2"/> 12 <repository owner="iuc" name="hal_halrenamesequences" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4dd28ce079d0"/>
7 <repository owner="iuc" name="hal_halrenamegenomes" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eb6ae9bf353d"/> 13 <repository owner="iuc" name="hal_hal2paf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9951a0cc9a11"/>
8 <repository owner="iuc" name="hal_haladdtobranch" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8d69e6b4aad3"/> 14 <repository owner="iuc" name="hal_maf2hal" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2900728b299a"/>
9 <repository owner="iuc" name="hal_hal2fasta" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="90503ee992eb"/> 15 <repository owner="iuc" name="hal_halalignedextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4638a5ff6186"/>
10 <repository owner="iuc" name="hal_halsummarizemutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="daef75c08ab4"/>
11 <repository owner="iuc" name="hal_halvalidate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="13917eec61b1"/>
12 <repository owner="iuc" name="hal_halextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ea84fd77a2d2"/>
13 <repository owner="iuc" name="hal_halindels" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e76cf92f5f72"/>
14 <repository owner="iuc" name="hal_halsnps" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="116020f2c8f3"/>
15 <repository owner="iuc" name="hal_halbranchmutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a84e089a22f8"/>
16 <repository owner="iuc" name="hal_halalignmentdepth" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25489f7c4cff"/> 16 <repository owner="iuc" name="hal_halalignmentdepth" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25489f7c4cff"/>
17 <repository owner="iuc" name="hal_halremovesubtree" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="19f3c5cad8ae"/> 17 <repository owner="iuc" name="hal_halremovesubtree" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="19f3c5cad8ae"/>
18 <repository owner="iuc" name="hal_hal2vg" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cb1771706300"/>
19 <repository owner="iuc" name="hal_hal2maf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a3ff8225d554"/>
20 <repository owner="iuc" name="hal_halvalidate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="13917eec61b1"/>
21 <repository owner="iuc" name="hal_halindels" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e76cf92f5f72"/>
22 <repository owner="iuc" name="hal_halbranchmutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a84e089a22f8"/>
23 <repository owner="iuc" name="hal_halliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="47c9d418a896"/>
24 <repository owner="iuc" name="hal_haladdtobranch" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="020607b4f91c"/>
18 <repository owner="iuc" name="hal_halreplacegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="de9294f0826f"/> 25 <repository owner="iuc" name="hal_halreplacegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="de9294f0826f"/>
19 <repository owner="iuc" name="hal_halalignedextract" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4638a5ff6186"/> 26 <repository owner="iuc" name="hal_halsummarizemutations" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="daef75c08ab4"/>
20 <repository owner="iuc" name="hal_halwiggleliftover" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="adc99beaf7d7"/>
21 <repository owner="iuc" name="hal_maf2hal" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2900728b299a"/>
22 <repository owner="iuc" name="hal_hal2vg" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cb1771706300"/>
23 <repository owner="iuc" name="hal_halrenamesequences" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4dd28ce079d0"/>
24 <repository owner="iuc" name="hal_halremovegenome" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f5f265415faa"/>
25 <repository owner="iuc" name="hal_hal2paf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9951a0cc9a11"/>
26 <repository owner="iuc" name="hal_hal2maf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a3ff8225d554"/>
27 <repository owner="iuc" name="hal_halsynteny" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f73497c76366"/> 27 <repository owner="iuc" name="hal_halsynteny" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f73497c76366"/>
28 <repository owner="iuc" name="hal_halupdatebranchlengths" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8f8634a2320b"/> 28 <repository owner="iuc" name="hal_halrenamegenomes" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eb6ae9bf353d"/>
29 <repository owner="iuc" name="hal_halcoverage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48d453b8f39d"/> 29 <repository owner="iuc" name="hal_halpctid" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="fcc762afb884"/>
30 <repository owner="iuc" name="hal_halstats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25dcde5bf94e"/> 30 <repository owner="iuc" name="hal_halsnps" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="116020f2c8f3"/>
31 </repositories> 31 </repositories>