Mercurial > repos > iuc > suite_bcftools

changeset 24:f218c747139a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/bcftools commit f6efda26965eb73c9107d367fd5ffdf246ed0dbc
author iuc
date Tue, 02 Dec 2025 08:03:28 +0000
parents bb07fb47fbe7
children
files repository_dependencies.xml
diffstat 1 files changed, 33 insertions(+), 33 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Sun Aug 18 09:58:33 2024 +0000
+++ b/repository_dependencies.xml	Tue Dec 02 08:03:28 2025 +0000
@@ -1,36 +1,36 @@
 <?xml version="1.0" ?>
 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package.">
-    <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="36b301c20b95"/>
-    <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5f9a85fc49b2"/>
-    <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="10da4a86ee5c"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b100ec6e628f"/>
-    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2f6e26a65721"/>
-    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b3732c5629a4"/>
-    <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7106fdae4823"/>
-    <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="553c14ea339c"/>
-    <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="df29f44b1bc0"/>
-    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2776dd881da8"/>
-    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5b5a2ec05d31"/>
-    <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4904c06618a9"/>
-    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a04b33124e4b"/>
-    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a40ff7d1a8d3"/>
-    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bb95ac29bfa5"/>
-    <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c16fba3e9f45"/>
-    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0155f20adc71"/>
-    <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="083211a34315"/>
-    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bbd4b6750d40"/>
-    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0385221230cd"/>
-    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5bd73b287e3b"/>
-    <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="913c052dfc71"/>
-    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="3e44f68c5f79"/>
-    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5d8dc10d436c"/>
-    <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1234ce354b19"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="445575d152ef"/>
-    <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9dac1d55dbfe"/>
-    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="63741f5e69d8"/>
-    <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0bb5f14a9955"/>
-    <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1bdbb4c62840"/>
-    <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="39cac1b56d93"/>
-    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4a8c5bdc3a55"/>
-    <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="411b66c55cf9"/>
+    <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1c91646b70a1"/>
+    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7f0e36aab62e"/>
+    <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e172f8d4b15a"/>
+    <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eea8a0f18b24"/>
+    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="61d4b20f3b11"/>
+    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d48799d1cbd1"/>
+    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a5669238dbcc"/>
+    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="2bf1b5a2baf3"/>
+    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d6f8a234358c"/>
+    <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a2e8d800df1f"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ae3bcee03985"/>
+    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7c7cf05cdb1e"/>
+    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="897a5bd932e4"/>
+    <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0ab4bbd0f9b5"/>
+    <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="11c2dc7762b8"/>
+    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6294f7c049f0"/>
+    <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c6c23f9ef8d6"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="171b8732210d"/>
+    <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9a099033525d"/>
+    <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a85677f5a2ab"/>
+    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="adb1d6cb6568"/>
+    <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bba9853e1fdc"/>
+    <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="051e5060b390"/>
+    <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5d8b9dd955c6"/>
+    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="eabe3a37b965"/>
+    <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="62ed6ee05b6f"/>
+    <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="da7365baa407"/>
+    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48d346686fc3"/>
+    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ac880195825d"/>
+    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e1c8ab368943"/>
+    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="3d7abebe05cb"/>
+    <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="3c6c2935919d"/>
+    <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="24e9954fec54"/>
 </repositories>
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