Mercurial > repos > iuc > suite_bcftools

comparison repository_dependencies.xml @ 22:9ac9d6f91e9e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 868f4386992de55d25da197660a43a913a09c8df
author iuc
date Wed, 14 Aug 2024 16:24:59 +0000
parents b23b76cc06f7
children bb07fb47fbe7
comparison
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21:b23b76cc06f7 22:9ac9d6f91e9e
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package."> 2 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package.">
3 <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="709fbd71915e"/> 3 <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d27dd200708b"/>
4 <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9873cbf829e2"/> 4 <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6c63458b30e2"/>
5 <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d231d90706d2"/> 5 <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f42373806ec9"/>
6 <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b71a6c0ab124"/> 6 <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8457b9066baf"/>
7 <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4f3623db0d08"/> 7 <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f002352aa5da"/>
8 <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="efed08e62aa2"/> 8 <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6e7a273d0234"/>
9 <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="077ce22da29c"/> 9 <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cb726d1f81d7"/>
10 <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1dfd3de77bd6"/> 10 <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="87fbd7666bbf"/>
11 <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="288bbe58d3eb"/> 11 <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="11029895899f"/>
12 <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="db1482b64838"/> 12 <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="48eefd9f05bc"/>
13 <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25344d32eda6"/> 13 <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="dc4609ae6d17"/>
14 <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9aa28226b77c"/> 14 <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7cd3958aee90"/>
15 <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b924159e4392"/> 15 <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9581d1a9f855"/>
16 <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="dc345d6dd3bb"/> 16 <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="05eeb887737a"/>
17 <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="172dac0e360f"/> 17 <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e6e83af2ce09"/>
18 <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="76c51218cd3c"/> 18 <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="abb482835ff3"/>
19 <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="72340a5c83ac"/> 19 <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e7ed9690c7c0"/>
20 <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b0ae703e4c93"/> 20 <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1dc12d95ecbe"/>
21 <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="53bc0aaea8ed"/> 21 <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cbea473f0118"/>
22 <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1f5e1549a11d"/> 22 <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0da7ae2caa98"/>
23 <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="621f9695bb59"/> 23 <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a15f45f1f45f"/>
24 <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="afeffe9e655d"/> 24 <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9d3af66e499d"/>
25 <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8bc4b0030794"/> 25 <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bf999c7c95bb"/>
26 <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0e125c0c6b2e"/> 26 <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4457ba46a0e6"/>
27 <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c1719c1fe926"/> 27 <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="926a70faa562"/>
28 <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="211ed30424ae"/> 28 <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4cea8b4e58e9"/>
29 <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="28747a819f18"/> 29 <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8d1b9b862794"/>
30 <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="49cc48b8432c"/> 30 <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="176243d4f467"/>
31 <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d7c246d52353"/> 31 <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ea7711ad08e5"/>
32 <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d6d682b69e65"/> 32 <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="3d17c458148a"/>
33 <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cee3b41c3253"/> 33 <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="535c71851f22"/>
34 <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ed8177f64f00"/> 34 <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8ba629f9c361"/>
35 <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5970245e8525"/> 35 <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7366d5abdc12"/>
36 </repositories> 36 </repositories>