Mercurial > repos > iuc > suite_bcftools

comparison repository_dependencies.xml @ 20:3d3d0d3902e0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit bfc4ff4956b94885638ae07a2560bac5f84fcca8
author iuc
date Tue, 16 Jul 2024 16:58:02 +0000
parents c992f930ce42
children b23b76cc06f7
comparison
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19:c992f930ce42 20:3d3d0d3902e0
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package."> 2 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package.">
3 <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="dfa649826d4d"/> 3 <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="288bbe58d3eb"/>
4 <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="54bc65e35364"/> 4 <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="211ed30424ae"/>
5 <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1d5f392b6701"/> 5 <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="72340a5c83ac"/>
6 <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f5bc20ddf5a1"/> 6 <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b0ae703e4c93"/>
7 <repository owner="iuc" name="bcftools_isec" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bbb3d75be7f3"/> 7 <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="621f9695bb59"/>
8 <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b1c80c55c984"/> 8 <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="dc345d6dd3bb"/>
9 <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1a524d07130c"/> 9 <repository owner="iuc" name="bcftools_mpileup" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="98ed897722c3"/>
10 <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6e9d7ea74645"/> 10 <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="db1482b64838"/>
11 <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="45cef081f524"/> 11 <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="25344d32eda6"/>
12 <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b6bb8672fa3e"/> 12 <repository owner="iuc" name="bcftools_stats" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="afeffe9e655d"/>
13 <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8cbbbf0d2e7d"/> 13 <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="efed08e62aa2"/>
14 <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1d8cafd3c084"/> 14 <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="49cc48b8432c"/>
15 <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a976885b6da5"/> 15 <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="077ce22da29c"/>
16 <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="bad8ee35e715"/> 16 <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d6d682b69e65"/>
17 <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0ea86a873c64"/> 17 <repository owner="iuc" name="bcftools_annotate" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9873cbf829e2"/>
18 <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="733e81d6f715"/> 18 <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="172dac0e360f"/>
19 <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8c6a1ac8df9d"/> 19 <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1dfd3de77bd6"/>
20 <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9c6a9f46407e"/> 20 <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b924159e4392"/>
21 <repository owner="iuc" name="bcftools_call" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="77d05350932c"/> 21 <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="b71a6c0ab124"/>
22 <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8ea14249cf0a"/> 22 <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="0e125c0c6b2e"/>
23 <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6ec0efcab4e5"/> 23 <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="8bc4b0030794"/>
24 <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="29ca2318675c"/> 24 <repository owner="iuc" name="bcftools_view" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="28747a819f18"/>
25 <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f86b9f21af7f"/> 25 <repository owner="iuc" name="bcftools_consensus" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5970245e8525"/>
26 <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c17c9eaf6dc8"/> 26 <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9aa28226b77c"/>
27 <repository owner="iuc" name="bcftools_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9ad62cffb9ef"/> 27 <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="53bc0aaea8ed"/>
28 <repository owner="iuc" name="bcftools_cnv" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="07231f570130"/> 28 <repository owner="iuc" name="bcftools_concat" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c1719c1fe926"/>
29 <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="da97e97f7788"/> 29 <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="cee3b41c3253"/>
30 <repository owner="iuc" name="bcftools_reheader" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="46c60e264318"/> 30 <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ed8177f64f00"/>
31 <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="a14ff44b60c8"/> 31 <repository owner="iuc" name="bcftools_filter" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d7c246d52353"/>
32 <repository owner="iuc" name="bcftools_roh" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ffd2079d8acc"/> 32 <repository owner="iuc" name="bcftools_norm" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="709fbd71915e"/>
33 <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="241034e0efca"/> 33 <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1f5e1549a11d"/>
34 <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="66c6bac50090"/> 34 <repository owner="iuc" name="bcftools_merge" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="76c51218cd3c"/>
35 <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="e33d7a52c6ad"/> 35 <repository owner="iuc" name="bcftools_csq" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d231d90706d2"/>
36 </repositories> 36 </repositories>