Mercurial > repos > iuc > stacks_ustacks

comparison stacks_ustacks.xml @ 2:f1099ae321eb draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 643293a896a2ccfac10fe995f48c7f01c1a89a7f
author iuc
date Mon, 26 Sep 2016 11:43:34 -0400
parents 60ff864ad3b8
children 74a205bb4d66
comparison
equal deleted inserted replaced
1:60ff864ad3b8 2:f1099ae321eb
1 <tool id="stacks_ustacks" name="Stacks: ustacks" version="@WRAPPER_VERSION@.2"> 1 <tool id="stacks_ustacks" name="Stacks: ustacks" version="@WRAPPER_VERSION@.0">
2 <description>align short reads into stacks</description> 2 <description>align short reads into stacks</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
111 <outputs> 111 <outputs>
112 <data format="txt" name="output_log" label="ustacks.log with ${tool.name} on ${on_string}" from_work_dir="ustacks.log" /> 112 <data format="txt" name="output_log" label="ustacks.log with ${tool.name} on ${on_string}" from_work_dir="ustacks.log" />
113 113
114 <collection name="tabs" type="list" label="Stacks from ${on_string}"> 114 <collection name="tabs" type="list" label="Stacks from ${on_string}">
115 <discover_datasets pattern="(?P&lt;name&gt;.+\.tags)\.tsv$" ext="tabular" directory="stacks_outputs" /> 115 <discover_datasets pattern="(?P&lt;name&gt;.+\.tags)\.tsv$" ext="tabular" directory="stacks_outputs" />
116 <discover_datasets pattern="(?P&lt;name&gt;.+\.snps)\.tsv$" ext="tabular" directory="stacks_outputs" />> 116 <discover_datasets pattern="(?P&lt;name&gt;.+\.snps)\.tsv$" ext="tabular" directory="stacks_outputs" />
117 <discover_datasets pattern="(?P&lt;name&gt;.+\.alleles)\.tsv$" ext="tabular" directory="stacks_outputs" /> 117 <discover_datasets pattern="(?P&lt;name&gt;.+\.alleles)\.tsv$" ext="tabular" directory="stacks_outputs" />
118 <discover_datasets pattern="(?P&lt;name&gt;.+\.models)\.tsv$" ext="tabular" directory="stacks_outputs" /> 118 <discover_datasets pattern="(?P&lt;name&gt;.+\.models)\.tsv$" ext="tabular" directory="stacks_outputs" />
119 </collection> 119 </collection>
120 </outputs> 120 </outputs>
121 121