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comparison stacks_stats.xml @ 4:2932dbe56135 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 74ee33c6e30744a6da8deb7116d431d80ee80edb
author iuc
date Fri, 07 Apr 2023 21:57:41 +0000
parents 7c23b1406c41
children
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3:7c23b1406c41 4:2932dbe56135
1 <tool id="stacks_stats" name="Stacks: statistics" version="@WRAPPER_VERSION@.0"> 1 <tool id="stacks_stats" name="Stacks: statistics" version="@WRAPPER_VERSION@.0">
2 <description>on stacks found for multiple samples</description> 2 <description>on stacks found for multiple samples</description>
3 <expand macro="bio_tools"/>
4 <macros> 3 <macros>
5 <import>macros.xml</import> 4 <import>macros.xml</import>
6 </macros> 5 </macros>
6 <expand macro="bio_tools"/>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <expand macro="stdio"/> 8 <expand macro="stdio"/>
9 <command><![CDATA[ 9 <command><![CDATA[
10 mkdir stacks_inputs 10 mkdir stacks_inputs
11 11
27 <param name="program" type="select" argument="--stacks-prog" label="Program which generated the stacks"> 27 <param name="program" type="select" argument="--stacks-prog" label="Program which generated the stacks">
28 <option value="ustacks">ustacks (denovo)</option> 28 <option value="ustacks">ustacks (denovo)</option>
29 <option value="pstacks">pstacks (refmap)</option> 29 <option value="pstacks">pstacks (refmap)</option>
30 </param> 30 </param>
31 31
32 <param name="logfile" argument="--logfile" format="txt" type="data" label="Log generated by the program" /> 32 <param argument="--logfile" format="txt" type="data" label="Log generated by the program" />
33 33
34 <param name="input_col" format="tabular,txt" type="data_collection" collection_type="list" label="Output from ustacks or pstacks" /> 34 <param name="input_col" format="tabular,txt" type="data_collection" collection_type="list" label="Output from ustacks or pstacks" />
35 </inputs> 35 </inputs>
36 36
37 <outputs> 37 <outputs>