Mercurial > repos > iuc > stacks_pstacks

diff stacks_pstacks.xml @ 2:e7a4318ed125 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 9401451df4a985ef5686864eaadafa077ffc0877
author iuc
date Mon, 27 Feb 2017 05:41:57 -0500
parents be52927032dc
children 02dc65436afa
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line diff
--- a/stacks_pstacks.xml	Mon Sep 26 11:42:45 2016 -0400
+++ b/stacks_pstacks.xml	Mon Feb 27 05:41:57 2017 -0500
@@ -13,7 +13,7 @@
 
         &&
 
-        #if $sample.ext == "sam":
+        #if $sample.is_of_type('sam'):
             #set $data_path = splitext($sample.element_identifier)[0]
             #set $data_path = re.sub(r'\.1$', '', $data_path)
             #set $data_path = "stacks_inputs/" + $data_path + ".sam"