Mercurial > repos > iuc > squirrel_phylo

comparison squirrel-phylo.xml @ 3:cb39e40802ef draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/squirrel commit 68ea06281ba78b828b8d1947745161697dc0fbc5
author iuc
date Tue, 10 Jun 2025 13:32:25 +0000
parents 153c1ee28c48
children
comparison
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2:a56d1b0468d1 3:cb39e40802ef
128 </section> 128 </section>
129 </inputs> 129 </inputs>
130 130
131 <outputs> 131 <outputs>
132 <!-- standard outputs--> 132 <!-- standard outputs-->
133 <data name="tree" format="newick" label="${tool.name} - phylogenetic tree" /> 133 <data name="tree" format="nexus" label="${tool.name} - phylogenetic tree" />
134 <data name="alignment" format="fasta" label="${tool.name} - aligned sequences" /> 134 <data name="alignment" format="fasta" label="${tool.name} - aligned sequences" />
135 <!-- apobec3 outputs--> 135 <!-- apobec3 outputs-->
136 <data name="svg" format="svg" label="${tool.name} - phylotree svg image"> 136 <data name="svg" format="svg" label="${tool.name} - phylotree svg image">
137 <filter>apobec3</filter> 137 <filter>apobec3</filter>
138 </data> 138 </data>
139 <data name="png" format="png" label="${tool.name} - phylotree png image"> 139 <data name="png" format="png" label="${tool.name} - phylotree png image">
140 <filter>apobec3</filter> 140 <filter>apobec3</filter>
141 </data> 141 </data>
142 <data name="aa_recon" format="png" label="${tool.name} - aa mutations ancestral reconstruction"> 142 <data name="aa_recon" format="csv" label="${tool.name} - aa mutations ancestral reconstruction">
143 <filter>apobec3</filter> 143 <filter>apobec3</filter>
144 </data> 144 </data>
145 <data name="branch_snps" format="png" label="${tool.name} - apobec3 nt mutations"> 145 <data name="branch_snps" format="csv" label="${tool.name} - apobec3 nt mutations">
146 <filter>apobec3</filter> 146 <filter>apobec3</filter>
147 </data> 147 </data>
148 </outputs> 148 </outputs>
149 149
150 <tests> 150 <tests>