Mercurial > repos > iuc > snpeff

annotate test-data/input.vcf @ 33:94653948fdb9 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit e4cbbb48006ac767c69efe53eab2a63306124bb5
author iuc
date Sat, 04 Oct 2025 17:00:46 +0000
parents b7029a54f73e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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81fba81425a4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 5c6d595ecbf2e4e39c25662a165c9e475e01ecd1
iuc
parents:
diff changeset
1 ##fileformat=VCFv4.1
81fba81425a4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 5c6d595ecbf2e4e39c25662a165c9e475e01ecd1
iuc
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
81fba81425a4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 5c6d595ecbf2e4e39c25662a165c9e475e01ecd1
iuc
parents:
diff changeset
3 ##contig=<ID="KJ660346",length=18959>
81fba81425a4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 5c6d595ecbf2e4e39c25662a165c9e475e01ecd1
iuc
parents:
diff changeset
4 ##reference=http://www.ncbi.nlm.nih.gov/nuccore/KJ660346.2
31
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT EBOV_2014_EM095 EBOV_2014_G3676
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
6 KJ660346.1 572 . A G . . . GT 0 0
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
7 KJ660346.1 800 . C T . . . GT 0 0
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
8 KJ660346.1 1024 . A C . . . GT 0 0
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
9 KJ660346.1 1288 . A T . . . GT 0 0
b7029a54f73e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 4cc10cfe702828a91ecf8bb58d3f84a36b0578f7
iuc
parents: 11
diff changeset
10 KJ660346.1 1492 . A G . . . GT 0 0