Mercurial > repos > iuc > snp_dists

comparison snp-dists.xml @ 1:b35fb92d8cf7 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-dists commit 6c633d56b703fb77beb12dbe93cdd67d01b83920"
author iuc
date Fri, 08 Oct 2021 07:15:30 +0000
parents ec9393c89c10
children
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0:ec9393c89c10 1:b35fb92d8cf7
1 <tool id="snp_dists" name="SNP distance matrix" version="@TOOL_VERSION@+galaxy0" python_template_version="3.5"> 1 <tool id="snp_dists" name="SNP distance matrix" version="@TOOL_VERSION@+galaxy0" python_template_version="3.5">
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">0.6.3</token> 3 <token name="@TOOL_VERSION@">0.8.2</token>
4 </macros> 4 </macros>
5 <description>Compute distance in SNPs between all sequences in a FASTA file</description> 5 <description>Compute distance in SNPs between all sequences in a FASTA file</description>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@TOOL_VERSION@">snp-dists</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">snp-dists</requirement>
8 </requirements> 8 </requirements>
9 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
10 snp-dists -q 10 snp-dists -q
11 $a 11 $a
12 $k 12 $k
13 $b 13 $b
14 -j \${GALAXY_SLOTS:-4}
14 '$input' > '$output' 15 '$input' > '$output'
15 ]]></command> 16 ]]></command>
16 <inputs> 17 <inputs>
17 <param name="input" type="data" format="fasta,fasta.gz" label="FASTA multiple sequence alignment" 18 <param name="input" type="data" format="fasta,fasta.gz" label="FASTA multiple sequence alignment"
18 help="Provide a multiple sequence alignment containing sequences of equal length" /> 19 help="Provide a multiple sequence alignment containing sequences of equal length" />