Mercurial > repos > iuc > sniffles

diff test-data/expected_output.vcf @ 4:a11b36964a39 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc commit efa9995b93e5f32a148d9c3cf65a008543e5a6b4
author iuc
date Thu, 26 Sep 2024 11:44:04 +0000
parents 6f22f224ffc5
children 66ad4a051460
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--- a/test-data/expected_output.vcf	Wed Sep 25 13:25:22 2024 +0000
+++ b/test-data/expected_output.vcf	Thu Sep 26 11:44:04 2024 +0000
@@ -1,7 +1,7 @@
 ##fileformat=VCFv4.2
 ##source=Sniffles2_2.4
-##command="/home/ross/miniconda3/envs/__sniffles@2.4/bin/sniffles -t 1 -i input.bam -v /tmp/tmpxu4n4sep/job_working_directory/000/2/outputs/dataset_5190dadb-3f7f-474a-a5d2-d0abcdc81344.dat --minsupport auto --max-splits-kb 0.1 --minsvlen 50 --mapq 20 --min-alignment-length 100 --cluster-binsize 100 --cluster-r 2.5 --allow-overwrite"
-##fileDate="2024/09/14 14:15:00"
+##command="/home/ross/miniconda3/envs/__sniffles@2.4/bin/sniffles -t 1 -i input.bam -v /tmp/tmpy46o57ly/job_working_directory/000/2/outputs/dataset_b3c7245e-3129-45a7-9a94-f6e837049557.dat --allow-overwrite --minsupport auto --max-splits-kb 0.1 --minsvlen 50 --mapq 20 --min-alignment-length 100 --cluster-binsize 100 --cluster-r 2.5"
+##fileDate="2024/09/26 18:20:57"
 ##contig=<ID=1,length=249250621>
 ##contig=<ID=2,length=243199373>
 ##contig=<ID=3,length=198022430>