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comparison seqtk_mutfa.xml @ 22:f2a792351212 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 75d5141110314addc160504e0a1f9cd66443de66
author iuc
date Wed, 16 Oct 2024 09:08:17 +0000
parents 8f26884c60b6
children
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21:ac22e16bfecd 22:f2a792351212
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@.1"> 2 <tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05">
3 <description>point mutate FASTA at specified positions</description> 3 <description>point mutate FASTA at specified positions</description>
4 <expand macro="bio_tools"/>
5 <macros> 4 <macros>
6 <import>macros.xml</import> 5 <import>macros.xml</import>
7 </macros> 6 </macros>
7 <expand macro="bio_tools"/>
8 <expand macro="requirements"/> 8 <expand macro="requirements"/>
9 <expand macro="stdio"/> 9 <expand macro="stdio"/>
10 <command><![CDATA[ 10 <command><![CDATA[
11 seqtk mutfa 11 seqtk mutfa
12 '$in_file' 12 '$in_file'
16 <inputs> 16 <inputs>
17 <expand macro="in_faq"/> 17 <expand macro="in_faq"/>
18 <param name="in_snp" type="data" format="tabular" label="Input SNP file"/> 18 <param name="in_snp" type="data" format="tabular" label="Input SNP file"/>
19 </inputs> 19 </inputs>
20 <outputs> 20 <outputs>
21 <data name="default" format_source="in_file" label="Mutated $in_file.name"/> 21 <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Mutated"/>
22 </outputs> 22 </outputs>
23 <tests> 23 <tests>
24 <test> 24 <test>
25 <param name="in_file" value="seqtk_mutfa.fa"/> 25 <param name="in_file" value="seqtk_mutfa.fa"/>
26 <param name="in_snp" value="seqtk_mutfa.snp"/> 26 <param name="in_snp" value="seqtk_mutfa.snp"/>