Mercurial > repos > iuc > schicexplorer_schicconsensusmatrices

comparison scHicConsensusMatrices.xml @ 2:aa7b43bf5c6b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/schicexplorer commit d350f8e73ae518245a21f9720f8282f06eb9cc5d
author iuc
date Fri, 14 Apr 2023 14:14:41 +0000
parents eb72d9d13e6a
children
comparison
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1:eb72d9d13e6a 2:aa7b43bf5c6b
1 <tool id="schicexplorer_schicconsensusmatrices" name="@BINARY@" version="@WRAPPER_VERSION@.0"> 1 <tool id="schicexplorer_schicconsensusmatrices" name="@BINARY@" version="@TOOL_VERSION@.1" profile="@PROFILE@">
2 <description>creates per cluster one average matrix</description> 2 <description>creates per cluster one average matrix</description>
3 <macros> 3 <macros>
4 <token name="@BINARY@">scHicConsensusMatrices</token> 4 <token name="@BINARY@">scHicConsensusMatrices</token>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
21 <inputs> 21 <inputs>
22 22
23 <expand macro="matrix_scooler_macro"/> 23 <expand macro="matrix_scooler_macro"/>
24 <param name='clusters' type='data' format='txt' label='Cluster file' help='Cluster file created by scHicCluster, scHicClusterCompartments, scHicClusterMinHash or scHicClusterSVL'/> 24 <param name='clusters' type='data' format='txt' label='Cluster file' help='Cluster file created by scHicCluster, scHicClusterCompartments, scHicClusterMinHash or scHicClusterSVL'/>
25 25
26 <param name='chromosomes' type='text' label='List of chromosomes to consider' help='Please separate the chromosomes by space'/>
27 </inputs> 26 </inputs>
28 <outputs> 27 <outputs>
29 <data name="outFileName" from_work_dir="consensus_matrix.scool" format="scool" label="${tool.name} on ${on_string}: Consensus matrices"/> 28 <data name="outFileName" from_work_dir="consensus_matrix.scool" format="scool" label="${tool.name} on ${on_string}: Consensus matrices"/>
30 </outputs> 29 </outputs>
31 <tests> 30 <tests>