Mercurial > repos > iuc > scanpy_cluster_reduce_dimension
comparison cluster_reduce_dimension.xml @ 4:3bb2afa64774 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit ef863b8664b89ae02bb232a1277798dd0503e785"
| author | iuc |
|---|---|
| date | Wed, 18 Dec 2019 20:52:37 +0000 |
| parents | 0b7f5380c73b |
| children | e160e1dd7fb0 |
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| 3:0b7f5380c73b | 4:3bb2afa64774 |
|---|---|
| 182 ]]></configfile> | 182 ]]></configfile> |
| 183 </configfiles> | 183 </configfiles> |
| 184 <inputs> | 184 <inputs> |
| 185 <expand macro="inputs_anndata"/> | 185 <expand macro="inputs_anndata"/> |
| 186 <conditional name="method"> | 186 <conditional name="method"> |
| 187 <param argument="method" type="select" label="Method used for plotting"> | 187 <param argument="method" type="select" label="Method used"> |
| 188 <option value="tl.louvain">Cluster cells into subgroups, using 'tl.louvain'</option> | 188 <option value="tl.louvain">Cluster cells into subgroups, using 'tl.louvain'</option> |
| 189 <option value="tl.leiden">Cluster cells into subgroups, using 'tl.leiden'</option> | 189 <option value="tl.leiden">Cluster cells into subgroups, using 'tl.leiden'</option> |
| 190 <option value="pp.pca">Computes PCA (principal component analysis) coordinates, loadings and variance decomposition, using 'pp.pca'</option> | 190 <option value="pp.pca">Computes PCA (principal component analysis) coordinates, loadings and variance decomposition, using 'pp.pca'</option> |
| 191 <option value="tl.pca">Computes PCA (principal component analysis) coordinates, loadings and variance decomposition, using 'tl.pca'</option> | 191 <option value="tl.pca">Computes PCA (principal component analysis) coordinates, loadings and variance decomposition, using 'tl.pca'</option> |
| 192 <option value="tl.diffmap">Diffusion Maps, using 'tl.diffmap'</option> | 192 <option value="tl.diffmap">Diffusion Maps, using 'tl.diffmap'</option> |