Mercurial > repos > iuc > samtools_view

comparison macros.xml @ 14:e63aab0f18c6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_view commit 5cb103832529f17e5c72e7f122758c13519fbe5e
author iuc
date Mon, 15 Aug 2022 09:13:14 +0000
parents b2821e450815
children e41d3ce2ab9f
comparison
equal deleted inserted replaced
13:ef12d752aba9 14:e63aab0f18c6
3 <requirements> 3 <requirements>
4 <requirement type="package" version="@TOOL_VERSION@">samtools</requirement> 4 <requirement type="package" version="@TOOL_VERSION@">samtools</requirement>
5 <yield/> 5 <yield/>
6 </requirements> 6 </requirements>
7 </xml> 7 </xml>
8 <token name="@TOOL_VERSION@">1.13</token> 8 <token name="@TOOL_VERSION@">1.15.1</token>
9 <token name="@PROFILE@">20.05</token> 9 <token name="@PROFILE@">20.05</token>
10 <token name="@FLAGS@"><![CDATA[ 10 <token name="@FLAGS@"><![CDATA[
11 #set $flags = 0 11 #set $flags = 0
12 #if $filter 12 #if $filter
13 #set $flags = sum(map(int, str($filter).split(','))) 13 #set $flags = sum(map(int, str($filter).split(',')))
101 #else 101 #else
102 #set use_ref=False 102 #set use_ref=False
103 #end if 103 #end if
104 ]]></token> 104 ]]></token>
105 105
106 <xml name="optional_reference"> 106 <xml name="optional_reference" token_help="" token_argument="">
107 <conditional name="addref_cond"> 107 <conditional name="addref_cond">
108 <param name="addref_select" type="select" label="Use a reference sequence"> 108 <param name="addref_select" type="select" label="Use a reference sequence">
109 <help>@HELP@</help> 109 <help>@HELP@</help>
110 <option value="no">No</option> 110 <option value="no">No</option>
111 <option value="history">Use a genome/index from the history</option> 111 <option value="history">Use a genome/index from the history</option>