Mercurial > repos > iuc > samtools_markdup
diff test-data/stats.txt @ 4:179eb2befd59 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
| author | iuc |
|---|---|
| date | Tue, 28 Sep 2021 16:03:23 +0000 |
| parents | ba5470b53602 |
| children | d70e33322da3 |
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--- a/test-data/stats.txt Thu Apr 22 12:58:22 2021 +0000 +++ b/test-data/stats.txt Tue Sep 28 16:03:23 2021 +0000 @@ -1,5 +1,16 @@ -READ 16 WRITTEN 16 -EXCLUDED 3 EXAMINED 13 -PAIRED 10 SINGLE 3 -DULPICATE PAIR 4 DUPLICATE SINGLE 2 -DUPLICATE TOTAL 6 +COMMAND: samtools markdup -@ 0 -s coordsort.sam /tmp/tmpea8lprdd/files/2/2/4/dataset_224df993-f6bf-4c7d-99a1-2e9dd51c2a57.dat +READ: 16 +WRITTEN: 16 +EXCLUDED: 3 +EXAMINED: 13 +PAIRED: 10 +SINGLE: 3 +DUPLICATE PAIR: 4 +DUPLICATE SINGLE: 2 +DUPLICATE PAIR OPTICAL: 0 +DUPLICATE SINGLE OPTICAL: 0 +DUPLICATE NON PRIMARY: 0 +DUPLICATE NON PRIMARY OPTICAL: 0 +DUPLICATE PRIMARY TOTAL: 6 +DUPLICATE TOTAL: 6 +ESTIMATED_LIBRARY_SIZE: 4