Mercurial > repos > iuc > samtools_faidx

comparison macros.xml @ 1:76c27c4861bd draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/samtools/samtools_faidx commit 7ba11a2aa8901b555a95e284e4fb83c8dca2833e
author iuc
date Tue, 04 Nov 2025 22:34:23 +0000
parents baa79754a17e
children
comparison
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0:baa79754a17e 1:76c27c4861bd
9 tool's version is controlled by the TOOL_VERSION token 9 tool's version is controlled by the TOOL_VERSION token
10 (because their version is ahead of the requirement version .. 10 (because their version is ahead of the requirement version ..
11 please only bump the minor version in order to let the requirement 11 please only bump the minor version in order to let the requirement
12 version catch up eventually). To find the tools check: 12 version catch up eventually). To find the tools check:
13 `grep "<tool" . -r | grep -v VERSION_SUFFIX | cut -d":" -f 1` --> 13 `grep "<tool" . -r | grep -v VERSION_SUFFIX | cut -d":" -f 1` -->
14 <token name="@TOOL_VERSION@">1.20</token> 14 <token name="@TOOL_VERSION@">1.22</token>
15 <token name="@VERSION_SUFFIX@">2</token> 15 <token name="@VERSION_SUFFIX@">0</token>
16 <token name="@PROFILE@">22.05</token> 16 <token name="@PROFILE@">22.05</token>
17 <token name="@FLAGS@"><![CDATA[ 17 <token name="@FLAGS@"><![CDATA[
18 #set $flags = 0 18 #set $flags = 0
19 #if $filter 19 #if $filter
20 #set $flags = sum(map(int, str($filter).split(','))) 20 #set $flags = sum(map(int, str($filter).split(',')))
218 </xml> 218 </xml>
219 219
220 <xml name="citations"> 220 <xml name="citations">
221 <citations> 221 <citations>
222 <citation type="doi">10.1093/gigascience/giab008</citation> 222 <citation type="doi">10.1093/gigascience/giab008</citation>
223 <citation type="doi">10.1093/bioinformatics/btr076</citation>
223 </citations> 224 </citations>
224 </xml> 225 </xml>
225 <xml name="version_command"> 226 <xml name="version_command">
226 <version_command><![CDATA[samtools 2>&1 | grep Version]]></version_command> 227 <version_command><![CDATA[samtools 2>&1 | grep Version]]></version_command>
227 </xml> 228 </xml>