Mercurial > repos > iuc > samtools_consensus

diff test-data/consen1c.sam @ 0:8f84f492414c draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/samtools/samtools_consensus commit 8d2369dc1bdafc743920a155c508c20114ebe655
author iuc
date Mon, 17 Nov 2025 07:30:05 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/consen1c.sam	Mon Nov 17 07:30:05 2025 +0000
@@ -0,0 +1,18 @@
+@SQ	SN:c1	LN:10
+@SQ	SN:c2	LN:15
+@SQ	SN:c3	LN:31
+@SQ	SN:c4	LN:10
+@CO	 c2    CC***AAGGTAA***CC
+@CO	
+@CO	+s1a   CC***AAGG*AA***CC
+@CO	+s1b   CC***AAGG*AA***CC
+@CO	+s2a   CCTTTAAGG*AATTTCC
+@CO	+s2b   CCTTTAACG*AATTTCC
+@CO	+s3    CCTTTAA***AATTTCC
+s1a	0	c2	3	0	6M1D4M	*	0	0	CCAAGGAACC	IIII&IIIII
+s1b	0	c2	3	0	6M1D4M	*	0	0	CCAAGGAACC	IIII&IIIII
+s2a	0	c2	3	0	2M3I4M1D2M3I2M	*	0	0	CCTTTAAGGAATTTCC	IIIIIII&IIIIIIII
+s2b	0	c2	3	0	2M3I4M1D2M3I2M	*	0	0	CCTTTAACGAATTTCC	IIIIIIIIIIIIIIII
+s3	0	c2	3	0	2M3I2M3D2M3I2M	*	0	0	CCTTTAAAATTTCC	IIIIII&&IIIIII
+s4	0	c3	4	0	10M	*	0	0	GAAAAAAAAG	AAAAAZZZZZ
+s5	0	c3	20	0	10M	*	0	0	TCCCCACCCT	AAAAAZZZZZ