Mercurial > repos > iuc > rgrnastar

annotate test-data/rnastar_test2.log @ 32:4746de55986e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5d0d8e40525840311dea1d212af911a6eade256
author iuc
date Sat, 31 May 2025 19:51:43 +0000
parents de5a55bd9112
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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11
de5a55bd9112 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 7edce75096aed3a1aac91d22e86a2739a53cb245
iuc
parents: 4
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1 Started job on | .*
de5a55bd9112 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 7edce75096aed3a1aac91d22e86a2739a53cb245
iuc
parents: 4
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2 Started mapping on | .*
de5a55bd9112 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 7edce75096aed3a1aac91d22e86a2739a53cb245
iuc
parents: 4
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3 Finished on | .*
de5a55bd9112 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 7edce75096aed3a1aac91d22e86a2739a53cb245
iuc
parents: 4
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4 Mapping speed, Million of reads per hour | .*
2
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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5
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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6 Number of input reads | 100
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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7 Average input read length | 75
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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8 UNIQUE READS:
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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9 Uniquely mapped reads number | 89
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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10 Uniquely mapped reads % | 89.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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11 Average mapped length | 74.80
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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12 Number of splices: Total | 47
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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13 Number of splices: Annotated (sjdb) | 0
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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14 Number of splices: GT/AG | 47
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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15 Number of splices: GC/AG | 0
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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16 Number of splices: AT/AC | 0
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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17 Number of splices: Non-canonical | 0
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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18 Mismatch rate per base, % | 1.73%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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19 Deletion rate per base | 0.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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20 Deletion average length | 0.00
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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21 Insertion rate per base | 0.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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22 Insertion average length | 0.00
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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23 MULTI-MAPPING READS:
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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24 Number of reads mapped to multiple loci | 1
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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25 % of reads mapped to multiple loci | 1.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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26 Number of reads mapped to too many loci | 0
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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27 % of reads mapped to too many loci | 0.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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28 UNMAPPED READS:
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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29 % of reads unmapped: too many mismatches | 0.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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30 % of reads unmapped: too short | 10.00%
8bc1d1801241 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit e5a5ad091c621348dc6ce2df861475ebc54a380e
iuc
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31 % of reads unmapped: other | 0.00%
4
13dba3e91459 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 0d434bca5083e908114d93e11094e48f49b98ed1
iuc
parents: 2
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32 CHIMERIC READS:
13dba3e91459 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 0d434bca5083e908114d93e11094e48f49b98ed1
iuc
parents: 2
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33 Number of chimeric reads | 0
13dba3e91459 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 0d434bca5083e908114d93e11094e48f49b98ed1
iuc
parents: 2
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34 % of chimeric reads | 0.00%