Mercurial > repos > iuc > reprof
diff test-data/test.fa.reprof @ 0:7c33ed152672 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/reprof commit cc30e84dcc309a93f49f75250aa3344f926cee5e-dirty
| author | iuc |
|---|---|
| date | Mon, 30 Nov 2015 20:10:58 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test.fa.reprof Mon Nov 30 20:10:58 2015 -0500 @@ -0,0 +1,96 @@ +##General +# No : Residue number (beginning with 1) +# AA : Amino acid +##Secondary structure +# PHEL : Secondary structure (H = Helix, E = Extended/Sheet, L = Loop) +# RI_S : Reliability index (0 to 9 (most reliable)) +# pH : Probability helix (0 to 1) +# pE : Probability extended (0 to 1) +# pL : Probability loop (0 to 1) +##Solvent accessibility +# PACC : Absolute +# PREL : Relative +# P10 : Relative in 10 states (0 - 9 (most exposed)) +# RI_A : Reliability index (0 to 9 (most reliable)) +# Pbe : Two states (b = buried, e = exposed) +# Pbie : Three states (b = buried, i = intermediate, e = exposed) +# +No AA PHEL RI_S pH pE pL PACC PREL P10 RI_A Pbe Pbie +1 M L 9 1 2 96 169 90 9 3 e e +2 K L 7 8 6 85 147 72 8 0 e e +3 A L 1 37 10 52 76 72 8 0 e e +4 T H 1 48 19 32 79 56 7 0 e e +5 K H 4 63 18 17 147 72 8 0 e e +6 L H 3 61 25 13 91 56 7 0 e e +7 V H 3 60 23 15 0 0 0 0 b b +8 L H 5 70 14 15 0 0 0 0 b b +9 G H 6 76 9 14 0 0 0 1 b b +10 A H 6 79 9 11 0 0 0 3 b b +11 V H 6 80 12 7 0 0 0 0 b b +12 I H 6 80 13 6 0 0 0 0 b b +13 L H 6 76 8 14 0 0 0 0 b b +14 G H 5 76 3 19 0 0 0 0 b b +15 S H 6 81 4 14 72 56 7 0 e e +16 T H 7 82 7 9 79 56 7 0 e e +17 L H 7 85 8 6 0 0 0 1 b b +18 L H 7 84 5 9 49 30 5 0 e i +19 A H 3 67 4 28 76 72 8 0 e e +20 G L 1 40 4 54 60 72 8 0 e e +21 C L 6 18 2 79 27 20 4 0 e i +22 S L 7 11 3 85 72 56 7 0 e e +23 S L 6 18 3 78 93 72 8 0 e e +24 N L 1 43 3 53 141 90 9 0 e e +25 A H 0 48 3 47 59 56 7 0 e e +26 K H 3 65 7 27 86 42 6 0 e e +27 I H 6 82 4 13 33 20 4 0 e i +28 D H 7 86 2 11 91 56 7 1 e e +29 Q H 7 88 2 8 110 56 7 0 e e +30 L H 7 86 2 11 0 0 0 0 b b +31 S H 6 82 1 16 54 42 6 0 e e +32 S H 7 84 0 14 72 56 7 0 e e +33 D H 6 84 0 14 91 56 7 0 e e +34 V H 8 93 1 5 17 12 3 0 b i +35 Q H 8 93 1 5 142 72 8 0 e e +36 T H 8 92 1 6 79 56 7 0 e e +37 L H 8 92 1 5 0 0 0 0 b b +38 N H 8 92 1 6 87 56 7 0 e e +39 A H 8 93 1 5 59 56 7 0 e e +40 K H 8 92 1 6 147 72 8 0 e e +41 V H 8 93 1 5 0 0 0 0 b b +42 D H 8 90 1 8 91 56 7 0 e e +43 Q H 7 87 1 10 110 56 7 0 e e +44 L H 6 81 1 16 32 20 4 0 e i +45 S H 5 76 1 22 72 56 7 0 e e +46 N H 5 79 0 20 113 72 8 0 e e +47 D H 6 80 0 18 91 56 7 0 e e +48 V H 8 90 1 7 28 20 4 0 e i +49 N H 8 89 1 9 113 72 8 0 e e +50 A H 8 92 1 6 59 56 7 0 e e +51 M H 7 86 1 12 56 30 5 0 e i +52 R H 7 85 1 13 138 56 7 0 e e +53 S H 6 79 1 18 72 56 7 0 e e +54 D H 6 80 1 18 91 56 7 0 e e +55 V H 8 89 1 8 0 0 0 0 b b +56 Q H 8 91 1 6 110 56 7 1 e e +57 A H 8 89 1 8 59 56 7 1 e e +58 A H 7 89 1 9 59 56 7 0 e e +59 K H 8 90 1 8 114 56 7 0 e e +60 D H 7 87 0 11 91 56 7 0 e e +61 D H 8 92 1 6 117 72 8 0 e e +62 A H 9 95 1 3 76 72 8 0 e e +63 A H 9 95 1 3 59 56 7 0 e e +64 R H 8 93 1 5 138 56 7 1 e e +65 A H 8 92 1 6 0 0 0 0 b b +66 N H 8 91 1 7 113 72 8 0 e e +67 Q H 8 93 1 5 110 56 7 1 e e +68 R H 8 90 1 7 138 56 7 1 e e +69 L H 8 94 1 4 91 56 7 0 e e +70 D H 8 94 1 4 91 56 7 0 e e +71 N H 8 94 1 4 141 90 9 0 e e +72 M H 9 94 1 4 105 56 7 0 e e +73 A H 8 90 1 7 59 56 7 0 e e +74 T H 8 89 2 8 79 56 7 0 e e +75 K H 7 87 2 10 147 72 8 1 e e +76 Y H 5 74 2 22 124 56 7 0 e e +77 R L 3 33 1 64 138 56 7 0 e e +78 K L 8 4 0 94 184 90 9 5 e e
