diff test-data/test.fa.reprof @ 0:7c33ed152672 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/reprof commit cc30e84dcc309a93f49f75250aa3344f926cee5e-dirty
author iuc
date Mon, 30 Nov 2015 20:10:58 -0500
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test.fa.reprof	Mon Nov 30 20:10:58 2015 -0500
@@ -0,0 +1,96 @@
+##General
+# No	: Residue number (beginning with 1)
+# AA	: Amino acid
+##Secondary structure
+# PHEL	: Secondary structure (H = Helix, E = Extended/Sheet, L = Loop)
+# RI_S	: Reliability index (0 to 9 (most reliable))
+# pH	: Probability helix (0 to 1)
+# pE	: Probability extended (0 to 1)
+# pL	: Probability loop (0 to 1)
+##Solvent accessibility
+# PACC	: Absolute
+# PREL	: Relative
+# P10	: Relative in 10 states (0 - 9 (most exposed))
+# RI_A	: Reliability index (0 to 9 (most reliable))
+# Pbe	: Two states (b = buried, e = exposed)
+# Pbie	: Three states (b = buried, i = intermediate, e = exposed)
+# 
+No	AA	PHEL	RI_S	pH	pE	pL	PACC	PREL	P10	RI_A	Pbe	Pbie
+1	M	L	9	1	2	96	169	90	9	3	e	e
+2	K	L	7	8	6	85	147	72	8	0	e	e
+3	A	L	1	37	10	52	76	72	8	0	e	e
+4	T	H	1	48	19	32	79	56	7	0	e	e
+5	K	H	4	63	18	17	147	72	8	0	e	e
+6	L	H	3	61	25	13	91	56	7	0	e	e
+7	V	H	3	60	23	15	0	0	0	0	b	b
+8	L	H	5	70	14	15	0	0	0	0	b	b
+9	G	H	6	76	9	14	0	0	0	1	b	b
+10	A	H	6	79	9	11	0	0	0	3	b	b
+11	V	H	6	80	12	7	0	0	0	0	b	b
+12	I	H	6	80	13	6	0	0	0	0	b	b
+13	L	H	6	76	8	14	0	0	0	0	b	b
+14	G	H	5	76	3	19	0	0	0	0	b	b
+15	S	H	6	81	4	14	72	56	7	0	e	e
+16	T	H	7	82	7	9	79	56	7	0	e	e
+17	L	H	7	85	8	6	0	0	0	1	b	b
+18	L	H	7	84	5	9	49	30	5	0	e	i
+19	A	H	3	67	4	28	76	72	8	0	e	e
+20	G	L	1	40	4	54	60	72	8	0	e	e
+21	C	L	6	18	2	79	27	20	4	0	e	i
+22	S	L	7	11	3	85	72	56	7	0	e	e
+23	S	L	6	18	3	78	93	72	8	0	e	e
+24	N	L	1	43	3	53	141	90	9	0	e	e
+25	A	H	0	48	3	47	59	56	7	0	e	e
+26	K	H	3	65	7	27	86	42	6	0	e	e
+27	I	H	6	82	4	13	33	20	4	0	e	i
+28	D	H	7	86	2	11	91	56	7	1	e	e
+29	Q	H	7	88	2	8	110	56	7	0	e	e
+30	L	H	7	86	2	11	0	0	0	0	b	b
+31	S	H	6	82	1	16	54	42	6	0	e	e
+32	S	H	7	84	0	14	72	56	7	0	e	e
+33	D	H	6	84	0	14	91	56	7	0	e	e
+34	V	H	8	93	1	5	17	12	3	0	b	i
+35	Q	H	8	93	1	5	142	72	8	0	e	e
+36	T	H	8	92	1	6	79	56	7	0	e	e
+37	L	H	8	92	1	5	0	0	0	0	b	b
+38	N	H	8	92	1	6	87	56	7	0	e	e
+39	A	H	8	93	1	5	59	56	7	0	e	e
+40	K	H	8	92	1	6	147	72	8	0	e	e
+41	V	H	8	93	1	5	0	0	0	0	b	b
+42	D	H	8	90	1	8	91	56	7	0	e	e
+43	Q	H	7	87	1	10	110	56	7	0	e	e
+44	L	H	6	81	1	16	32	20	4	0	e	i
+45	S	H	5	76	1	22	72	56	7	0	e	e
+46	N	H	5	79	0	20	113	72	8	0	e	e
+47	D	H	6	80	0	18	91	56	7	0	e	e
+48	V	H	8	90	1	7	28	20	4	0	e	i
+49	N	H	8	89	1	9	113	72	8	0	e	e
+50	A	H	8	92	1	6	59	56	7	0	e	e
+51	M	H	7	86	1	12	56	30	5	0	e	i
+52	R	H	7	85	1	13	138	56	7	0	e	e
+53	S	H	6	79	1	18	72	56	7	0	e	e
+54	D	H	6	80	1	18	91	56	7	0	e	e
+55	V	H	8	89	1	8	0	0	0	0	b	b
+56	Q	H	8	91	1	6	110	56	7	1	e	e
+57	A	H	8	89	1	8	59	56	7	1	e	e
+58	A	H	7	89	1	9	59	56	7	0	e	e
+59	K	H	8	90	1	8	114	56	7	0	e	e
+60	D	H	7	87	0	11	91	56	7	0	e	e
+61	D	H	8	92	1	6	117	72	8	0	e	e
+62	A	H	9	95	1	3	76	72	8	0	e	e
+63	A	H	9	95	1	3	59	56	7	0	e	e
+64	R	H	8	93	1	5	138	56	7	1	e	e
+65	A	H	8	92	1	6	0	0	0	0	b	b
+66	N	H	8	91	1	7	113	72	8	0	e	e
+67	Q	H	8	93	1	5	110	56	7	1	e	e
+68	R	H	8	90	1	7	138	56	7	1	e	e
+69	L	H	8	94	1	4	91	56	7	0	e	e
+70	D	H	8	94	1	4	91	56	7	0	e	e
+71	N	H	8	94	1	4	141	90	9	0	e	e
+72	M	H	9	94	1	4	105	56	7	0	e	e
+73	A	H	8	90	1	7	59	56	7	0	e	e
+74	T	H	8	89	2	8	79	56	7	0	e	e
+75	K	H	7	87	2	10	147	72	8	1	e	e
+76	Y	H	5	74	2	22	124	56	7	0	e	e
+77	R	L	3	33	1	64	138	56	7	0	e	e
+78	K	L	8	4	0	94	184	90	9	5	e	e