Mercurial > repos > iuc > raceid_trajectory

diff raceid_trajectory.xml @ 10:74bc1eee6419 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid3 commit 0ffa71ef9f8d020fe7ba94502db8cec26fd8741f
author iuc
date Tue, 05 Nov 2024 16:32:47 +0000
parents 12f9d9d074c9
children
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--- a/raceid_trajectory.xml	Wed Aug 24 18:05:35 2022 +0000
+++ b/raceid_trajectory.xml	Tue Nov 05 16:32:47 2024 +0000
@@ -4,6 +4,7 @@
         <import>macros.xml</import>
         <import>macros_cheetah.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <expand macro="version_command_config" prog="pseudotemporal.R" cheetah="TRAJECTORY_CHEETAH" />
 
@@ -136,7 +137,7 @@
 
 StemID is an algorithm for the inference of lineage trees and differentiation trajectories based on pseudo-temporal ordering of single-cell transcriptomes. It utilizies the clusters predicted by RaceID clustering tool.
 
-In a nutshell, StemID infers links between clusters which are more populated with intermediate single-cell transcriptomes than expected by chance. 
+In a nutshell, StemID infers links between clusters which are more populated with intermediate single-cell transcriptomes than expected by chance.
 
 This will generate an RDS object, and a PDF showing a minimal spanning tree between the clusters, with the strength between clusters given by the colour and thickness of the branches.