Mercurial > repos > iuc > quast
annotate test-data/test10_missasembly.tab @ 18:c791615bcc55 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 5b2225491719b922003c69f0394bfc3eb238b360
| author | iuc |
|---|---|
| date | Sat, 04 Oct 2025 15:48:40 +0000 |
| parents | 25368452f73b |
| children |
| rev | line source |
|---|---|
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15
25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
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1 All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
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2 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
3 Assembly contig1 contig2 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
4 # misassemblies 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
5 # contig misassemblies 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
6 # c. relocations 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
7 # c. translocations 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
8 # c. inversions 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
9 # scaffold misassemblies 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
10 # s. relocations 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
11 # s. translocations 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
12 # s. inversions 0 0 |
|
25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
13 # misassembled contigs 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
14 Misassembled contigs length 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
15 # local misassemblies 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
16 # scaffold gap ext. mis. 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
17 # scaffold gap loc. mis. 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
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18 # structural variations - - |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
19 # possible TEs - - |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
20 # unaligned mis. contigs 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
21 # mismatches 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
22 # indels 0 0 |
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25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
23 # indels (<= 5 bp) 0 0 |
|
25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
24 # indels (> 5 bp) 0 0 |
|
25368452f73b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
iuc
parents:
diff
changeset
|
25 Indels length 0 0 |
