Mercurial > repos > iuc > qiime_count_seqs

comparison count_seqs.xml @ 4:6fa025b2685e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 88c494b035a34b097247a29bfd3515875d94ce2b
author iuc
date Fri, 04 Aug 2017 18:18:05 -0400
parents d6b87f4f7be9
children 6fbdeb8bf1db
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3:ad5e1bc6ee80 4:6fa025b2685e
1 <tool id="qiime_count_seqs" name="Count sequences" version="@WRAPPER_VERSION@.0"> 1 <tool id="qiime_count_seqs" name="Count the sequences" version="@WRAPPER_VERSION@.0">
2 <description>Count the sequences in a fasta file</description> 2 <description>in a fasta file (count_seqs)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <version_command>count_seqs.py --version</version_command> 7 <version_command>count_seqs.py --version</version_command>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 count_seqs.py 9 count_seqs.py
10 --input_fps '$input_fps' 10 --input_fps '$input_fps'
11 -o '$output_fp' 11 -o '$output_fp'
12 ]]></command> 12 ]]></command>
13 <inputs> 13 <inputs>
14 <param argument="--input_fps" type="data" format="fasta" multiple="True" label="Input sequence file" help=""/> 14 <param argument="--input_fps" type="data" format="fasta" multiple="true" label="Input sequence file"/>
15 </inputs> 15 </inputs>
16 <outputs> 16 <outputs>
17 <data name="output_fp" format="txt" label="${tool.name} on ${on_string}: sequence counts"/> 17 <data name="output_fp" format="txt" label="${tool.name} on ${on_string}: sequence counts"/>
18 </outputs> 18 </outputs>
19 <tests> 19 <tests>