Mercurial > repos > iuc > qiime_core_diversity

comparison core_diversity_analyses.xml @ 9:b3bb1b83f98f draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 12:03:48 +0000
parents 25b1faa56152
children
comparison
equal deleted inserted replaced
8:93a546c29a7e 9:b3bb1b83f98f
1 <tool id="qiime_core_diversity" name="Run a core set of QIIME diversity analyses" version="@WRAPPER_VERSION@.0"> 1 <tool id="qiime_core_diversity" name="Run a core set of QIIME diversity analyses" version="@WRAPPER_VERSION@.0" profile="@PROFILE@">
2 <description>(core_diversity_analyses)</description> 2 <description>(core_diversity_analyses)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <version_command>core_diversity_analyses.py --version</version_command> 7 <version_command>core_diversity_analyses.py --version</version_command>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 ## set matplotlib backend 9 @MPLBACKEND@
10 echo "backend:agg" > matplotlibrc &&
11
12 core_diversity_analyses.py 10 core_diversity_analyses.py
13 --input_biom_fp '$input_biom_fp' 11 --input_biom_fp '$input_biom_fp'
14 -o core_diversity_analyses 12 -o core_diversity_analyses
15 --mapping_fp '$mapping_fp' 13 --mapping_fp '$mapping_fp'
16 --sampling_depth '$sampling_depth' 14 --sampling_depth '$sampling_depth'