Mercurial > repos > iuc > pygenometracks

annotate test-data/test15.ini @ 15:c7af51147b55 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
author iuc
date Wed, 01 Oct 2025 19:34:28 +0000
parents 2f09a07c94ab
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
1 [x-axis]
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
2 where = bottom
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
3 [genes_1_0]
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
4 file = dm3_genes.bed.gz
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
5 title = flybase backbone blue
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
6 color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
7 border_color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
8 style = flybase
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
9 height_utr = 1.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
10 color_utr = grey
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
11 arrowhead_included = false
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
12 arrowhead_fraction = 0.004
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
13 color_backbone = blue
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
14 display = stacked
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
15 height = 10.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
16 labels = true
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
17 all_labels_inside = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
18 labels_in_margin = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
19 fontstyle = normal
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
20 file_type = bed
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
21 global_max_row = false
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
22 max_labels = 60
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
23 line_width = 0.5
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
24 overlay_previous = no
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
25 [genes_2_0]
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
26 file = dm3_genes.bed.gz
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
27 title = UCSC backbone blue
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
28 color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
29 border_color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
30 style = UCSC
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
31 arrow_interval = 10
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
32 color_backbone = blue
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
33 display = stacked
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
34 height = 10.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
35 labels = true
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
36 all_labels_inside = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
37 labels_in_margin = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
38 fontstyle = normal
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
39 file_type = bed
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
40 global_max_row = false
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
41 max_labels = 60
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
42 line_width = 0.5
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
43 overlay_previous = no
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
44 [genes_3_0]
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
45 file = dm3_genes.bed.gz
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
46 title = tssarrow
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
47 color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
48 border_color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
49 style = tssarrow
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
50 height_utr = 1.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
51 color_utr = grey
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
52 display = stacked
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
53 height = 10.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
54 labels = true
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
55 all_labels_inside = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
56 labels_in_margin = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
57 fontstyle = normal
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
58 file_type = bed
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
59 global_max_row = false
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
60 max_labels = 60
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
61 line_width = 0.5
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
62 overlay_previous = no
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
63 [genes_4_0]
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
64 file = dm3_genes.bed.gz
15
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
65 title = tssarrow 20kb increase arrowhead
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
66 color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
67 border_color = #000000
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
68 style = tssarrow
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
69 height_utr = 1.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
70 color_utr = grey
15
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
71 arrow_length = 20000
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
72 arrowhead_fraction = 0.01
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
73 display = stacked
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
74 height = 10.0
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
75 labels = true
11
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
76 all_labels_inside = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
77 labels_in_margin = false
2f09a07c94ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
iuc
parents: 7
diff changeset
78 fontstyle = normal
7
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
79 file_type = bed
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
80 global_max_row = false
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
81 max_labels = 60
d691445a7d2e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d82c81c0900d94b9363379ed4df9a067a058dbd2"
iuc
parents:
diff changeset
82 line_width = 0.5
15
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
83 overlay_previous = no
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
84 [exonarrows]
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
85 file = dm3_genes.bed.gz
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
86 title = exonarrows
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
87 style = exonarrows
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
88 color = red
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
89 color_utr = blue
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
90 color_arrow = white
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
91 line_width = 2
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
92 border_color = red
c7af51147b55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9fdf4ad9c2a9c026720e2b01460b7ac85056b068
iuc
parents: 11
diff changeset
93 height = 10