Mercurial > repos > iuc > pretext_map

comparison pretext_map.xml @ 2:47a13c1848c6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pretext commit 474777450e3f847cb9badb020b56469f226546da"
author iuc
date Mon, 16 Aug 2021 07:31:41 +0000
parents 9781c90fb254
children 94176d166ff2
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1:9781c90fb254 2:47a13c1848c6
1 <tool id="pretext_map" name="PretextMap" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> 1 <tool id="pretext_map" name="PretextMap" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01">
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">0.1.6</token> 3 <token name="@TOOL_VERSION@">0.1.7</token>
4 <token name="@VERSION_SUFFIX@">0</token> 4 <token name="@VERSION_SUFFIX@">0</token>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@TOOL_VERSION@">pretextmap</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">pretextmap</requirement>
8 <requirement type="package" version="1.12">samtools</requirement> 8 <requirement type="package" version="1.13">samtools</requirement>
9 </requirements> 9 </requirements>
10 <version_command>PretextMap --version</version_command> 10 <version_command>PretextMap --version</version_command>
11 <command detect_errors="exit_code"><![CDATA[ 11 <command detect_errors="exit_code"><![CDATA[
12 #if $input.is_of_type("bam"): 12 #if $input.is_of_type("bam"):
13 samtools view -h '${input}' | 13 samtools view -h '${input}' |