Mercurial > repos > iuc > plasmidfinder
diff test-data/test_2/logfile_test2.log @ 4:65b333eed5c2 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/plasmidfinder commit 232de7b04558cf28e2caffb8a5e0520b7dd1b645
| author | iuc |
|---|---|
| date | Tue, 10 Feb 2026 17:52:55 +0000 |
| parents | f52df366f012 |
| children |
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--- a/test-data/test_2/logfile_test2.log Thu Mar 02 14:57:54 2023 +0000 +++ b/test-data/test_2/logfile_test2.log Tue Feb 10 17:52:55 2026 +0000 @@ -1,7 +1,27 @@ -{'plasmidfinder': {'results': {'Gram Positive': {'Inc18': 'No hit found', +{'plasmidfinder': {'results': {'Gram Positive': {'Inc18': {'rep14a_2_ORF1(pKQ10)_EFU01917': {'HSP_length': 402, + 'accession': 'EFU01917', + 'contig_name': 'NA', + 'coverage': 100.0, + 'hit_id': 'rep14a_2_ORF1(pKQ10)_EFU01917', + 'identity': 99.5, + 'note': 'ORF1(pKQ10)', + 'plasmid': 'rep14a', + 'position_in_ref': '1..403', + 'positions_in_contig': 'NA..NA', + 'template_length': 402}}, 'Rep3': 'No hit found', - 'Rep_trans': 'No hit found'}}, - 'run_info': {'date': '09.09.2022', 'time': '08:53:07'}, + 'Rep_trans': {'rep14a_2_ORF1(pKQ10)_EFU01917': {'HSP_length': 402, + 'accession': 'EFU01917', + 'contig_name': 'NA', + 'coverage': 100.0, + 'hit_id': 'rep14a_2_ORF1(pKQ10)_EFU01917', + 'identity': 99.5, + 'note': 'ORF1(pKQ10)', + 'plasmid': 'rep14a', + 'position_in_ref': '1..403', + 'positions_in_contig': 'NA..NA', + 'template_length': 402}}}}, + 'run_info': {'date': '10.02.2026', 'time': '15:20:44'}, 'user_input': {'file_format': 'fastq', - 'filename(s)': ['/tmp/tmpj3aqa6lu/files/3/2/3/dataset_32342c91-595d-40c3-b39a-60aa67724edc.dat'], + 'filename(s)': ['/tmp/tmp1yi7ks0w/files/0/e/3/dataset_0e36e86f-0bbd-4a32-940e-8e30997c8d02.dat'], 'method': 'kma'}}}