Mercurial > repos > iuc > picrust2_place_seqs

comparison place_seqs.xml @ 1:a1dac088b84c draft default tip

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planemo upload for repository https://github.com/picrust/picrust2 commit f8c32a316582ff102c9b7edf3817000691ef9eea
author iuc
date Tue, 13 Aug 2024 12:10:32 +0000
parents 37c128deea66
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0:37c128deea66 1:a1dac088b84c
66 <has_text text="prokaryotic/pro_ref/" negate="true"/> 66 <has_text text="prokaryotic/pro_ref/" negate="true"/>
67 <has_text text="--ref_dir" negate="true"/> 67 <has_text text="--ref_dir" negate="true"/>
68 </assert_command> 68 </assert_command>
69 </test> 69 </test>
70 <!-- input data does not really work with fungal reference - but sufficient for CLI test --> 70 <!-- input data does not really work with fungal reference - but sufficient for CLI test -->
71 <test expect_num_outputs="1" expect_exit_code="1" expect_failure="true"> 71 <test expect_exit_code="1" expect_failure="true">
72 <param name="study_fasta" ftype="fasta" value="study_seqs_test.fasta"/> 72 <param name="study_fasta" ftype="fasta" value="study_seqs_test.fasta"/>
73 <param name="placement_tool" value="epa-ng"/> 73 <param name="placement_tool" value="epa-ng"/>
74 <param name="min_align" value="0.10"/> 74 <param name="min_align" value="0.10"/>
75 <conditional name="ref_dir"> 75 <conditional name="ref_dir">
76 <param name="selector" value="fungi/fungi_ITS/"/> 76 <param name="selector" value="fungi/fungi_ITS/"/>