# HG changeset patch # User iuc # Date 1678276800 0 # Node ID 1aa4a987a864cf147955ac2a5e84e9eb223b1b1c # Parent 3090b3a0be9feb4863a4f6e1f210022305910422 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pbgcpp commit b9fe99d8335825c6c23f569034354323b794127a diff -r 3090b3a0be9f -r 1aa4a987a864 tool-data/all_fasta.loc.sample --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/all_fasta.loc.sample Wed Mar 08 12:00:00 2023 +0000 @@ -0,0 +1,18 @@ +#This file lists the locations and dbkeys of all the fasta files +#under the "genome" directory (a directory that contains a directory +#for each build). The script extract_fasta.py will generate the file +#all_fasta.loc. This file has the format (white space characters are +#TAB characters): +# +# +# +#So, all_fasta.loc could look something like this: +# +#apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.fa +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa +#hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa +# +#Your all_fasta.loc file should contain an entry for each individual +#fasta file. So there will be multiple fasta files for each build, +#such as with hg19 above. +# diff -r 3090b3a0be9f -r 1aa4a987a864 tool_data_table_conf.xml.sample --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Wed Mar 08 12:00:00 2023 +0000 @@ -0,0 +1,6 @@ + + + value, dbkey, name, path + +
+
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