Mercurial > repos > iuc > pangolin

comparison pangolin.xml @ 9:c602f4aa863f draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pangolin commit e2382656cdcba4384a4ee75ce24fe11e2d4d30c2"
author iuc
date Sun, 29 Aug 2021 10:56:28 +0000
parents cf00be3d99c0
children c149015cb0b5
comparison
equal deleted inserted replaced
8:cf00be3d99c0 9:c602f4aa863f
86 <conditional name="db"> 86 <conditional name="db">
87 <param name="source" value="download" /> 87 <param name="source" value="download" />
88 </conditional> 88 </conditional>
89 <output name="output1" ftype="tabular"> 89 <output name="output1" ftype="tabular">
90 <assert_contents> 90 <assert_contents>
91 <has_text_matching expression="B.1.1\t0.0" /> 91 <has_text_matching expression="B\.1\.1\t0\.0" />
92 <has_text text="passed_qc" /> 92 <has_text text="passed_qc" />
93 <has_n_lines n="1" /> 93 <has_n_lines n="1" />
94 </assert_contents> 94 </assert_contents>
95 </output> 95 </output>
96 </test> 96 </test>
101 <conditional name="db"> 101 <conditional name="db">
102 <param name="source" value="download" /> 102 <param name="source" value="download" />
103 </conditional> 103 </conditional>
104 <output name="output1" ftype="tabular"> 104 <output name="output1" ftype="tabular">
105 <assert_contents> 105 <assert_contents>
106 <has_text_matching expression="B.1.1\t0.0\t*PUSHER" /> 106 <has_text_matching expression="B\.1\.1.*\t0\.0\t*PUSHER" />
107 <has_text text="passed_qc" /> 107 <has_text text="passed_qc" />
108 <has_n_lines n="1" /> 108 <has_n_lines n="1" />
109 </assert_contents> 109 </assert_contents>
110 </output> 110 </output>
111 </test> 111 </test>
115 <conditional name="db"> 115 <conditional name="db">
116 <param name="source" value="download" /> 116 <param name="source" value="download" />
117 </conditional> 117 </conditional>
118 <output name="output1" ftype="tabular"> 118 <output name="output1" ftype="tabular">
119 <assert_contents> 119 <assert_contents>
120 <has_text_matching expression="B.1.1\t0.0" /> 120 <has_text_matching expression="B\.1\.1\t0\.0" />
121 <has_text text="passed_qc" /> 121 <has_text text="passed_qc" />
122 <has_n_lines n="1" /> 122 <has_n_lines n="1" />
123 </assert_contents> 123 </assert_contents>
124 </output> 124 </output>
125 <output name="align1" file="aln1.fasta" ftype="fasta"> 125 <output name="align1" file="aln1.fasta" ftype="fasta">