Mercurial > repos > iuc > pal2nal

comparison test-data/outputs/expected_codon.txt @ 0:a2a40f3bfbbd draft default tip

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planemo upload for repository https://github.com/georgehe23/tools-iuc/tree/main/tools/pal2nal commit aed49bdc26e503297e1fc394ada087042dc23386
author iuc
date Sun, 09 Nov 2025 10:56:06 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:a2a40f3bfbbd
1 M V G S L N C I V A V S Q N M G I G K N
2 BC070280 ATG GTT GGT TCG CTA AAC TGC ATC GTC GCT GTG TCC CAG AAC ATG GGC ATC GGC AAG AAC
3 - - - - L N C I V N V S Q K M G I I R N
4 pseudogene --- --- --- --- CTA AAC TGC ATT GTC AAT GAT TCC CAG AAG ATG GGC ATC ATC AGG AAT
5 ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ###
6
7 G D L P W P P L R N E F R Y F Q R M T T
8 BC070280 GGG GAC CTG CCC TGG CCA CCG CTC AGG AAT GAA TTC AGA TAT TTC CAG AGA ATG ACC ACA
9 G D L P * P Q L K N K F 2 - F Q R M T T
10 pseudogene GGG GAC CTG CCC TGA CCT CAG CTC AAA AAT AAA TTC GA- --- TTC CAA AGA ATG ACC ACA
11 ### ### ### ### ### ### ###
12
13 T S S V E G K Q N L V I M G K K T W F S
14 BC070280 ACC TCT TCA GTA GAA GGT AAA CAG AAT CTG GTG ATT ATG GGT AAG AAG ACC TGG TTC TCC
15 P S S A E G K E N L V F L I R K N W F S
16 pseudogene CCC TCT TCA GCA GAG GGT AAA GAA AAT TTA GTA TTT TTA ATT AGG AAG AAC TGG TTC TCG
17 ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ###
18
19 I P E K N R P L K G R I N L V L S R E L
20 BC070280 ATT CCT GAG AAG AAT CGA CCT TTA AAG GGT AGA ATT AAT TTA GTT CTC AGC AGA GAA CTC
21 I T E K N Q P L K Y I I N L V V S R E S
22 pseudogene ATT ACT GAG AAG AAT CAA CCT TTA AAG TAT ATA ATT AAT TTA GTT GTC AGT AGA GAA TCC
23 ### ### ### ### ### ### ### ### ### ### ### ### ### ### ###
24
25 K E P P Q G A H F L S R S L D D A L K L
26 BC070280 AAG GAA CCT CCA CAA GGA GCT CAT TTT CTT TCC AGA AGT CTA GAT GAT GCC TTA AAA CTT
27 K E P P Q R P P F L D * S L G D A L K R
28 pseudogene AAG GAA CCA CCG CAA AGA CCT CCT TTT CTT GAC TAA AGT CTG GGT GAT GCC TTA AAA CGT
29 ### ### ### ### ###
30
31 T E Q P E L A N K V D M L W I V G G S S
32 BC070280 ACT GAA CAA CCA GAA TTA GCA AAT AAA GTA GAC ATG CTC TGG ATA GTT GGT GGC AGT TCT
33 I E Q L K L A N K Q D V F F T V G G S S
34 pseudogene ATT GAG CAA CTA AAA TTA GCA AAT AAA CAA GAC GTG TTT TTT ACA GTG GGA GGC AGT TCT
35 ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ###
36
37 V Y K E A M N H P G H L K L F V T R I M
38 BC070280 GTT TAT AAG GAA GCC ATG AAT CAC CCA GGC CAT CTT AAA CTA TTT GTG ACA AGG ATC ATG
39 V Y K E S M N * - D H F K L F V T W I M
40 pseudogene GTT TAT AAG GAA TCC ATG AAT TGA --- GAC CAT TTT AAA CTA TTT GTG ACA TGG ATC ATG
41
42
43 Q D F E S D T F F - P - E I D L E K Y K
44 BC070280 CAA GAC TTT GAA AGT GAC ACG TTT TTT --- CCA --- GAA ATT GAT TTG GAG AAA TAT AAA
45 Q D F Q S D T F F S 4 - E G D L E K Y K
46 pseudogene CAG GAC TTT CAA AGT GAC ACG TTT TTT TCC CCT A-- GAA GGT GAT TTA GAG AAA TAT AAA
47
48
49 L L P E Y P - G V L S D V Q E E K G I K
50 BC070280 CTT CTG CCA GAA TAC CCA --- GGT GTT CTC TCT GAT GTC CAG GAG GAG AAA GGC ATT AAG
51 L L P E Y P Q G V V S D V E E E K G I K
52 pseudogene CTT CTC CCA GAA TAC CCA CAA GGT GTT GTC TCT GAT GTG GAG GAG GAG AAA GGC ATT AAG
53
54
55 Y K F E V Y E K N D
56 BC070280 TAC AAA TTT GAA GTA TAT GAG AAG AAT GAT
57 Y K F E V Y E K N D
58 pseudogene TAC AAA TTT GAA GTA TAT GAA AAG AAT GAT
59
60