Mercurial > repos > iuc > pairtools_split
diff test-data/pairs_output_yaml.stats @ 0:8ca8c65fc33f draft
planemo upload for repository https://github.com/open2c/pairtools commit 89826caaf2e2bc933ef2ce407f21260ad69bc5c7
| author | iuc |
|---|---|
| date | Sun, 22 Dec 2024 15:39:27 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pairs_output_yaml.stats Sun Dec 22 15:39:27 2024 +0000 @@ -0,0 +1,361 @@ +no_filter: + total: 592 + total_unmapped: 4 + total_single_sided_mapped: 147 + total_mapped: 441 + total_nodups: 441 + cis: 441 + pair_types: + UU: 405 + NR: 119 + MU: 21 + UR: 19 + RU: 17 + MR: 6 + MM: 4 + NU: 1 + cis_1kb+: 75 + cis_2kb+: 72 + cis_4kb+: 70 + cis_10kb+: 67 + cis_20kb+: 61 + cis_40kb+: 61 + summary: + frac_cis: 1.0 + frac_cis_1kb+: 0.17006802721088435 + frac_cis_2kb+: 0.16326530612244897 + frac_cis_4kb+: 0.15873015873015872 + frac_cis_10kb+: 0.15192743764172337 + frac_cis_20kb+: 0.1383219954648526 + frac_cis_40kb+: 0.1383219954648526 + frac_dups: 0.0 + complexity_naive: .nan + dist_freq_convergence: + convergence_dist: 421697 + strands_w_max_convergence_dist: ++ + convergence_rel_diff_threshold: 0.05 + n_cis_pairs_below_convergence_dist: + ++: 25 + --: 26 + -+: 7 + +-: 383 + n_cis_pairs_below_convergence_dist_all_strands: 441 + n_cis_pairs_above_convergence_dist_all_strands: 0 + frac_cis_in_cis_below_convergence_dist: + ++: 0.05668934240362812 + --: 0.05895691609977324 + -+: 0.015873015873015872 + +-: 0.8684807256235828 + frac_cis_in_cis_below_convergence_dist_all_strands: 1.0 + frac_cis_in_cis_above_convergence_dist_all_strands: 0.0 + frac_total_mapped_in_cis_below_convergence_dist: + ++: 0.05668934240362812 + --: 0.05895691609977324 + -+: 0.015873015873015872 + +-: 0.8684807256235828 + frac_total_mapped_in_cis_below_convergence_dist_all_strands: 1.0 + frac_total_mapped_in_cis_above_convergence_dist_all_strands: 0.0 + frac_total_nodups_in_cis_below_convergence_dist: + ++: 0.05668934240362812 + --: 0.05895691609977324 + -+: 0.015873015873015872 + +-: 0.8684807256235828 + frac_total_nodups_in_cis_below_convergence_dist_all_strands: 1.0 + frac_total_nodups_in_cis_above_convergence_dist_all_strands: 0.0 + chrom_freq: + Test_seq/Test_seq: 441 + dist_freq: + +-: + 0: 0 + 1: 0 + 2: 0 + 3: 0 + 4: 0 + 6: 0 + 7: 0 + 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