Mercurial > repos > iuc > pairtools_split

comparison test-data/output_dedup_pairs.stats @ 0:8ca8c65fc33f draft

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planemo upload for repository https://github.com/open2c/pairtools commit 89826caaf2e2bc933ef2ce407f21260ad69bc5c7
author iuc
date Sun, 22 Dec 2024 15:39:27 +0000
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-1:000000000000 0:8ca8c65fc33f
1 total 1992
2 total_unmapped 914
3 total_single_sided_mapped 287
4 total_mapped 791
5 total_dups 9
6 total_nodups 782
7 cis 597
8 trans 185
9 pair_types/NN 853
10 pair_types/UU 782
11 pair_types/NU 234
12 pair_types/MU 53
13 pair_types/MM 40
14 pair_types/NM 21
15 pair_types/DD 9
16 cis_1kb+ 185
17 cis_2kb+ 171
18 cis_4kb+ 151
19 cis_10kb+ 114
20 cis_20kb+ 80
21 cis_40kb+ 46
22 summary/frac_cis 0.7634271099744245
23 summary/frac_cis_1kb+ 0.23657289002557544
24 summary/frac_cis_2kb+ 0.2186700767263427
25 summary/frac_cis_4kb+ 0.19309462915601022
26 summary/frac_cis_10kb+ 0.14578005115089515
27 summary/frac_cis_20kb+ 0.10230179028132992
28 summary/frac_cis_40kb+ 0.058823529411764705
29 summary/frac_dups 0.011378002528445006
30 summary/complexity_naive 34495.88583157276
31 summary/dist_freq_convergence/convergence_dist 1333521
32 summary/dist_freq_convergence/strands_w_max_convergence_dist ++
33 summary/dist_freq_convergence/convergence_rel_diff_threshold 0.05
34 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/++ 49
35 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-- 58
36 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-+ 65
37 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/+- 425
38 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist_all_strands 597
39 summary/dist_freq_convergence/n_cis_pairs_above_convergence_dist_all_strands 0
40 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/++ 0.08207705192629816
41 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-- 0.09715242881072027
42 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-+ 0.10887772194304858
43 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/+- 0.711892797319933
44 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist_all_strands 1.0
45 summary/dist_freq_convergence/frac_cis_in_cis_above_convergence_dist_all_strands 0.0
46 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/++ 0.061946902654867256
47 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-- 0.07332490518331226
48 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-+ 0.08217446270543616
49 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/+- 0.5372945638432364
50 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist_all_strands 0.754740834386852
51 summary/dist_freq_convergence/frac_total_mapped_in_cis_above_convergence_dist_all_strands 0.0
52 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/++ 0.06265984654731457
53 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-- 0.0741687979539642
54 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-+ 0.08312020460358056
55 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/+- 0.5434782608695652
56 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist_all_strands 0.7634271099744245
57 summary/dist_freq_convergence/frac_total_nodups_in_cis_above_convergence_dist_all_strands 0.0
58 chrom_freq/chrIV/chrIV 83
59 chrom_freq/chrVII/chrVII 55
60 chrom_freq/chrXV/chrXV 53
61 chrom_freq/chrXIII/chrXIII 46
62 chrom_freq/chrII/chrII 41
63 chrom_freq/chrXVI/chrXVI 40
64 chrom_freq/chrXIV/chrXIV 37
65 chrom_freq/chrX/chrX 37
66 chrom_freq/chrXII/chrXII 36
67 chrom_freq/chrXI/chrXI 36
68 chrom_freq/chrM/chrM 33
69 chrom_freq/chrVIII/chrVIII 30
70 chrom_freq/chrIX/chrIX 22
71 chrom_freq/chrV/chrV 21
72 chrom_freq/chrIII/chrIII 12
73 chrom_freq/chrVI/chrVI 8
74 chrom_freq/chrI/chrI 7
75 chrom_freq/chrVII/chrXV 6
76 chrom_freq/chrIV/chrXII 6
77 chrom_freq/chrIV/chrXIII 6
78 chrom_freq/chrVII/chrXII 6
79 chrom_freq/chrII/chrVII 5
80 chrom_freq/chrXII/chrXIII 5
81 chrom_freq/chrIV/chrX 5
82 chrom_freq/chrX/chrXIV 4
83 chrom_freq/chrII/chrIV 4
84 chrom_freq/chrII/chrXVI 4
85 chrom_freq/chrXIV/chrXVI 4
86 chrom_freq/chrII/chrXIV 4
87 chrom_freq/chrVII/chrXIV 4
88 chrom_freq/chrXI/chrXV 4
89 chrom_freq/chrXI/chrXII 4
90 chrom_freq/chrIV/chrVII 4
91 chrom_freq/chrXIII/chrXV 3
92 chrom_freq/chrXI/chrXVI 3
93 chrom_freq/chrII/chrXIII 3
94 chrom_freq/chrXI/chrXIII 3
95 chrom_freq/chrVII/chrIX 3
96 chrom_freq/chrVIII/chrXIII 3
97 chrom_freq/chrX/chrXII 3
98 chrom_freq/chrX/chrXIII 3
99 chrom_freq/chrXIII/chrXIV 3
100 chrom_freq/chrV/chrXVI 3
101 chrom_freq/chrIV/chrV 3
102 chrom_freq/chrIV/chrVIII 3
103 chrom_freq/chrIV/chrXI 3
104 chrom_freq/chrIV/chrXV 3
105 chrom_freq/chrIV/chrXVI 3
106 chrom_freq/chrXV/chrXVI 3
107 chrom_freq/chrIX/chrXII 3
108 chrom_freq/chrXIII/chrXVI 2
109 chrom_freq/chrX/chrXVI 2
110 chrom_freq/chrIV/chrVI 2
111 chrom_freq/chrIV/chrXIV 2
112 chrom_freq/chrXI/chrXIV 2
113 chrom_freq/chrVII/chrXVI 2
114 chrom_freq/chrIX/chrX 2
115 chrom_freq/chrVII/chrVIII 2
116 chrom_freq/chrIII/chrX 2
117 chrom_freq/chrIX/chrXV 2
118 chrom_freq/chrIII/chrV 2
119 chrom_freq/chrXIV/chrXV 2
120 chrom_freq/chrXII/chrXV 2
121 chrom_freq/chrV/chrX 2
122 chrom_freq/chrI/chrX 2
123 chrom_freq/chrII/chrXV 2
124 chrom_freq/chrII/chrVIII 1
125 chrom_freq/chrXII/chrXIV 1
126 chrom_freq/chrXII/chrXVI 1
127 chrom_freq/chrII/chrX 1
128 chrom_freq/chrI/chrXV 1
129 chrom_freq/chrIII/chrXIII 1
130 chrom_freq/chrII/chrXI 1
131 chrom_freq/chrVI/chrX 1
132 chrom_freq/chrIII/chrVIII 1
133 chrom_freq/chrIX/chrXI 1
134 chrom_freq/chrV/chrM 1
135 chrom_freq/chrV/chrVI 1
136 chrom_freq/chrV/chrXI 1
137 chrom_freq/chrV/chrXIII 1
138 chrom_freq/chrV/chrXIV 1
139 chrom_freq/chrV/chrXV 1
140 chrom_freq/chrVI/chrXI 1
141 chrom_freq/chrVIII/chrXV 1
142 chrom_freq/chrVI/chrXII 1
143 chrom_freq/chrVI/chrXIII 1
144 chrom_freq/chrVI/chrXIV 1
145 chrom_freq/chrVI/chrXVI 1
146 chrom_freq/chrVII/chrXIII 1
147 chrom_freq/chrVIII/chrIX 1
148 chrom_freq/chrVIII/chrXI 1
149 chrom_freq/chrVIII/chrXII 1
150 chrom_freq/chrVI/chrVII 1
151 dist_freq/0-1/+- 0
152 dist_freq/0-1/-+ 0
153 dist_freq/0-1/-- 0
154 dist_freq/0-1/++ 0
155 dist_freq/1-2/+- 0
156 dist_freq/1-2/-+ 0
157 dist_freq/1-2/-- 0
158 dist_freq/1-2/++ 0
159 dist_freq/2-3/+- 0
160 dist_freq/2-3/-+ 0
161 dist_freq/2-3/-- 0
162 dist_freq/2-3/++ 0
163 dist_freq/3-4/+- 0
164 dist_freq/3-4/-+ 0
165 dist_freq/3-4/-- 0
166 dist_freq/3-4/++ 0
167 dist_freq/4-6/+- 0
168 dist_freq/4-6/-+ 1
169 dist_freq/4-6/-- 0
170 dist_freq/4-6/++ 1
171 dist_freq/6-7/+- 0
172 dist_freq/6-7/-+ 0
173 dist_freq/6-7/-- 0
174 dist_freq/6-7/++ 0
175 dist_freq/7-10/+- 0
176 dist_freq/7-10/-+ 0
177 dist_freq/7-10/-- 0
178 dist_freq/7-10/++ 0
179 dist_freq/10-13/+- 0
180 dist_freq/10-13/-+ 0
181 dist_freq/10-13/-- 0
182 dist_freq/10-13/++ 0
183 dist_freq/13-18/+- 0
184 dist_freq/13-18/-+ 0
185 dist_freq/13-18/-- 0
186 dist_freq/13-18/++ 0
187 dist_freq/18-24/+- 0
188 dist_freq/18-24/-+ 0
189 dist_freq/18-24/-- 0
190 dist_freq/18-24/++ 0
191 dist_freq/24-32/+- 0
192 dist_freq/24-32/-+ 0
193 dist_freq/24-32/-- 0
194 dist_freq/24-32/++ 0
195 dist_freq/32-42/+- 0
196 dist_freq/32-42/-+ 0
197 dist_freq/32-42/-- 0
198 dist_freq/32-42/++ 0
199 dist_freq/42-56/+- 0
200 dist_freq/42-56/-+ 0
201 dist_freq/42-56/-- 0
202 dist_freq/42-56/++ 0
203 dist_freq/56-75/+- 0
204 dist_freq/56-75/-+ 0
205 dist_freq/56-75/-- 0
206 dist_freq/56-75/++ 0
207 dist_freq/75-100/+- 0
208 dist_freq/75-100/-+ 1
209 dist_freq/75-100/-- 0
210 dist_freq/75-100/++ 0
211 dist_freq/100-133/+- 1
212 dist_freq/100-133/-+ 0
213 dist_freq/100-133/-- 1
214 dist_freq/100-133/++ 0
215 dist_freq/133-178/+- 6
216 dist_freq/133-178/-+ 2
217 dist_freq/133-178/-- 1
218 dist_freq/133-178/++ 0
219 dist_freq/178-237/+- 116
220 dist_freq/178-237/-+ 3
221 dist_freq/178-237/-- 0
222 dist_freq/178-237/++ 0
223 dist_freq/237-316/+- 218
224 dist_freq/237-316/-+ 6
225 dist_freq/237-316/-- 1
226 dist_freq/237-316/++ 0
227 dist_freq/316-422/+- 32
228 dist_freq/316-422/-+ 3
229 dist_freq/316-422/-- 0
230 dist_freq/316-422/++ 0
231 dist_freq/422-562/+- 2
232 dist_freq/422-562/-+ 4
233 dist_freq/422-562/-- 0
234 dist_freq/422-562/++ 0
235 dist_freq/562-750/+- 1
236 dist_freq/562-750/-+ 3
237 dist_freq/562-750/-- 0
238 dist_freq/562-750/++ 0
239 dist_freq/750-1000/+- 0
240 dist_freq/750-1000/-+ 8
241 dist_freq/750-1000/-- 0
242 dist_freq/750-1000/++ 1
243 dist_freq/1000-1334/+- 0
244 dist_freq/1000-1334/-+ 1
245 dist_freq/1000-1334/-- 2
246 dist_freq/1000-1334/++ 0
247 dist_freq/1334-1778/+- 0
248 dist_freq/1334-1778/-+ 4
249 dist_freq/1334-1778/-- 4
250 dist_freq/1334-1778/++ 1
251 dist_freq/1778-2371/+- 1
252 dist_freq/1778-2371/-+ 4
253 dist_freq/1778-2371/-- 1
254 dist_freq/1778-2371/++ 0
255 dist_freq/2371-3162/+- 4
256 dist_freq/2371-3162/-+ 3
257 dist_freq/2371-3162/-- 1
258 dist_freq/2371-3162/++ 0
259 dist_freq/3162-4217/+- 1
260 dist_freq/3162-4217/-+ 2
261 dist_freq/3162-4217/-- 3
262 dist_freq/3162-4217/++ 3
263 dist_freq/4217-5623/+- 3
264 dist_freq/4217-5623/-+ 2
265 dist_freq/4217-5623/-- 3
266 dist_freq/4217-5623/++ 1
267 dist_freq/5623-7499/+- 6
268 dist_freq/5623-7499/-+ 2
269 dist_freq/5623-7499/-- 6
270 dist_freq/5623-7499/++ 2
271 dist_freq/7499-10000/+- 3
272 dist_freq/7499-10000/-+ 2
273 dist_freq/7499-10000/-- 3
274 dist_freq/7499-10000/++ 3
275 dist_freq/10000-13335/+- 5
276 dist_freq/10000-13335/-+ 1
277 dist_freq/10000-13335/-- 3
278 dist_freq/10000-13335/++ 6
279 dist_freq/13335-17783/+- 2
280 dist_freq/13335-17783/-+ 3
281 dist_freq/13335-17783/-- 5
282 dist_freq/13335-17783/++ 4
283 dist_freq/17783-23714/+- 5
284 dist_freq/17783-23714/-+ 0
285 dist_freq/17783-23714/-- 4
286 dist_freq/17783-23714/++ 4
287 dist_freq/23714-31623/+- 4
288 dist_freq/23714-31623/-+ 4
289 dist_freq/23714-31623/-- 4
290 dist_freq/23714-31623/++ 1
291 dist_freq/31623-42170/+- 4
292 dist_freq/31623-42170/-+ 2
293 dist_freq/31623-42170/-- 3
294 dist_freq/31623-42170/++ 6
295 dist_freq/42170-56234/+- 2
296 dist_freq/42170-56234/-+ 2
297 dist_freq/42170-56234/-- 4
298 dist_freq/42170-56234/++ 4
299 dist_freq/56234-74989/+- 2
300 dist_freq/56234-74989/-+ 0
301 dist_freq/56234-74989/-- 4
302 dist_freq/56234-74989/++ 2
303 dist_freq/74989-100000/+- 0
304 dist_freq/74989-100000/-+ 1
305 dist_freq/74989-100000/-- 1
306 dist_freq/74989-100000/++ 3
307 dist_freq/100000-133352/+- 1
308 dist_freq/100000-133352/-+ 0
309 dist_freq/100000-133352/-- 0
310 dist_freq/100000-133352/++ 2
311 dist_freq/133352-177828/+- 2
312 dist_freq/133352-177828/-+ 1
313 dist_freq/133352-177828/-- 1
314 dist_freq/133352-177828/++ 0
315 dist_freq/177828-237137/+- 2
316 dist_freq/177828-237137/-+ 0
317 dist_freq/177828-237137/-- 2
318 dist_freq/177828-237137/++ 2
319 dist_freq/237137-316228/+- 1
320 dist_freq/237137-316228/-+ 0
321 dist_freq/237137-316228/-- 0
322 dist_freq/237137-316228/++ 1
323 dist_freq/316228-421697/+- 0
324 dist_freq/316228-421697/-+ 0
325 dist_freq/316228-421697/-- 0
326 dist_freq/316228-421697/++ 0
327 dist_freq/421697-562341/+- 0
328 dist_freq/421697-562341/-+ 0
329 dist_freq/421697-562341/-- 0
330 dist_freq/421697-562341/++ 1
331 dist_freq/562341-749894/+- 1
332 dist_freq/562341-749894/-+ 0
333 dist_freq/562341-749894/-- 0
334 dist_freq/562341-749894/++ 1
335 dist_freq/749894-1000000/+- 0
336 dist_freq/749894-1000000/-+ 0
337 dist_freq/749894-1000000/-- 0
338 dist_freq/749894-1000000/++ 0
339 dist_freq/1000000-1333521/+- 0
340 dist_freq/1000000-1333521/-+ 0
341 dist_freq/1000000-1333521/-- 1
342 dist_freq/1000000-1333521/++ 0
343 dist_freq/1333521-1778279/+- 0
344 dist_freq/1333521-1778279/-+ 0
345 dist_freq/1333521-1778279/-- 0
346 dist_freq/1333521-1778279/++ 0
347 dist_freq/1778279-2371374/+- 0
348 dist_freq/1778279-2371374/-+ 0
349 dist_freq/1778279-2371374/-- 0
350 dist_freq/1778279-2371374/++ 0
351 dist_freq/2371374-3162278/+- 0
352 dist_freq/2371374-3162278/-+ 0
353 dist_freq/2371374-3162278/-- 0
354 dist_freq/2371374-3162278/++ 0
355 dist_freq/3162278-4216965/+- 0
356 dist_freq/3162278-4216965/-+ 0
357 dist_freq/3162278-4216965/-- 0
358 dist_freq/3162278-4216965/++ 0
359 dist_freq/4216965-5623413/+- 0
360 dist_freq/4216965-5623413/-+ 0
361 dist_freq/4216965-5623413/-- 0
362 dist_freq/4216965-5623413/++ 0
363 dist_freq/5623413-7498942/+- 0
364 dist_freq/5623413-7498942/-+ 0
365 dist_freq/5623413-7498942/-- 0
366 dist_freq/5623413-7498942/++ 0
367 dist_freq/7498942-10000000/+- 0
368 dist_freq/7498942-10000000/-+ 0
369 dist_freq/7498942-10000000/-- 0
370 dist_freq/7498942-10000000/++ 0
371 dist_freq/10000000-13335214/+- 0
372 dist_freq/10000000-13335214/-+ 0
373 dist_freq/10000000-13335214/-- 0
374 dist_freq/10000000-13335214/++ 0
375 dist_freq/13335214-17782794/+- 0
376 dist_freq/13335214-17782794/-+ 0
377 dist_freq/13335214-17782794/-- 0
378 dist_freq/13335214-17782794/++ 0
379 dist_freq/17782794-23713737/+- 0
380 dist_freq/17782794-23713737/-+ 0
381 dist_freq/17782794-23713737/-- 0
382 dist_freq/17782794-23713737/++ 0
383 dist_freq/23713737-31622777/+- 0
384 dist_freq/23713737-31622777/-+ 0
385 dist_freq/23713737-31622777/-- 0
386 dist_freq/23713737-31622777/++ 0
387 dist_freq/31622777-42169650/+- 0
388 dist_freq/31622777-42169650/-+ 0
389 dist_freq/31622777-42169650/-- 0
390 dist_freq/31622777-42169650/++ 0
391 dist_freq/42169650-56234133/+- 0
392 dist_freq/42169650-56234133/-+ 0
393 dist_freq/42169650-56234133/-- 0
394 dist_freq/42169650-56234133/++ 0
395 dist_freq/56234133-74989421/+- 0
396 dist_freq/56234133-74989421/-+ 0
397 dist_freq/56234133-74989421/-- 0
398 dist_freq/56234133-74989421/++ 0
399 dist_freq/74989421-100000000/+- 0
400 dist_freq/74989421-100000000/-+ 0
401 dist_freq/74989421-100000000/-- 0
402 dist_freq/74989421-100000000/++ 0
403 dist_freq/100000000-133352143/+- 0
404 dist_freq/100000000-133352143/-+ 0
405 dist_freq/100000000-133352143/-- 0
406 dist_freq/100000000-133352143/++ 0
407 dist_freq/133352143-177827941/+- 0
408 dist_freq/133352143-177827941/-+ 0
409 dist_freq/133352143-177827941/-- 0
410 dist_freq/133352143-177827941/++ 0
411 dist_freq/177827941-237137371/+- 0
412 dist_freq/177827941-237137371/-+ 0
413 dist_freq/177827941-237137371/-- 0
414 dist_freq/177827941-237137371/++ 0
415 dist_freq/237137371-316227766/+- 0
416 dist_freq/237137371-316227766/-+ 0
417 dist_freq/237137371-316227766/-- 0
418 dist_freq/237137371-316227766/++ 0
419 dist_freq/316227766-421696503/+- 0
420 dist_freq/316227766-421696503/-+ 0
421 dist_freq/316227766-421696503/-- 0
422 dist_freq/316227766-421696503/++ 0
423 dist_freq/421696503-562341325/+- 0
424 dist_freq/421696503-562341325/-+ 0
425 dist_freq/421696503-562341325/-- 0
426 dist_freq/421696503-562341325/++ 0
427 dist_freq/562341325-749894209/+- 0
428 dist_freq/562341325-749894209/-+ 0
429 dist_freq/562341325-749894209/-- 0
430 dist_freq/562341325-749894209/++ 0
431 dist_freq/749894209-1000000000/+- 0
432 dist_freq/749894209-1000000000/-+ 0
433 dist_freq/749894209-1000000000/-- 0
434 dist_freq/749894209-1000000000/++ 0
435 dist_freq/1000000000+/+- 0
436 dist_freq/1000000000+/-+ 0
437 dist_freq/1000000000+/-- 0
438 dist_freq/1000000000+/++ 0