Mercurial > repos > iuc > pairtools_dedup

comparison dedup.xml @ 3:e36bce668b44 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/open2c/pairtools commit f60e7663dc3fd1a564e691ef35d35f35b0a851ad
author iuc
date Wed, 24 Sep 2025 11:48:35 +0000
parents 74df4a44471b
children
comparison
equal deleted inserted replaced
2:74df4a44471b 3:e36bce668b44
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 #if $pairs_path.is_of_type('4dn_pairs.gz') or $pairs_path.is_of_type('4dn_pairsam.gz'): 8 #if $pairs_path.is_of_type('4dn_pairs.gz') or $pairs_path.is_of_type('4dn_pairsam.gz'):
9 #set $input_link = "input.gz" 9 #set $input_link = "input.gz"
10 #set $output_dedup_pairs_link = "output_dedup_pairs.ga" 10 #set $output_dedup_pairs_link = "output_dedup_pairs.gz"
11 #set $output_dups_pairs_link = "output_dups_pairs.gz" 11 #set $output_dups_pairs_link = "output_dups_pairs.gz"
12 #else 12 #else
13 #set $input_link = "input" 13 #set $input_link = "input"
14 #set $output_dedup_pairs_link = "output_dedup_pairs" 14 #set $output_dedup_pairs_link = "output_dedup_pairs"
15 #set $output_dups_pairs_link = "output_dups_pairs" 15 #set $output_dups_pairs_link = "output_dups_pairs"