Mercurial > repos > iuc > package_tpp_4_8_0
diff tool_dependencies.xml @ 2:3d56da50b195 draft default tip
Uploaded
| author | iuc |
|---|---|
| date | Wed, 29 Apr 2015 22:45:55 -0400 |
| parents | 8dcea6d6341e |
| children |
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--- a/tool_dependencies.xml Sat Apr 11 05:22:02 2015 -0400 +++ b/tool_dependencies.xml Wed Apr 29 22:45:55 2015 -0400 @@ -2,19 +2,21 @@ <tool_dependency> <package name="trans_proteomic_pipeline" version="4.8.0"> <install version="1.0"> - <actions architecture="x86_64" os="linux"> - <action type="download_by_url">http://share.gruenings.eu/tpp-4.8.0-Linux-x86_64.tar.gz</action> - <action type="shell_command">rm tpp-4.8.0-Linux-x86_64.tar.gz</action> - <action type="move_directory_files"> - <source_directory>.</source_directory> - <destination_directory>$INSTALL_DIR</destination_directory> - </action> - <action type="set_environment"> - <environment_variable action="set_to" name="TPP_ROOT_PATH">$INSTALL_DIR</environment_variable> - <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable> - <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable> - </action> - </actions> + <actions_group> + <actions architecture="x86_64" os="linux"> + <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/tpp/tpp-4.8.0-Linux-x86_64.tar.gz</action> + <action type="shell_command">rm tpp-4.8.0-Linux-x86_64.tar.gz</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + <action type="set_environment"> + <environment_variable action="set_to" name="TPP_ROOT_PATH">$INSTALL_DIR</environment_variable> + <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable> + </action> + </actions> + </actions_group> </install> <readme> Installs and complils the trans proteomic pipeline in version 4.8.0.