Mercurial > repos > iuc > package_scikit_learn_0_13

comparison tool_dependencies.xml @ 0:a05da181571f draft

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author iuc
date Mon, 08 Jul 2013 10:21:14 -0400
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-1:000000000000 0:a05da181571f
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="lapack" version="3.4.2">
4 <repository changeset_revision="a6b8f46acca7" name="package_lapack_3_4" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="atlas" version="3.10.1">
7 <repository changeset_revision="25dc49b0d6d5" name="package_atlas_3_10" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="numpy" version="1.7.1">
10 <repository changeset_revision="ad6ebe2c75ef" name="package_numpy_1_7" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
11 </package>
12 <package name="scipy" version="0.12.0">
13 <repository changeset_revision="e4f395310680" name="package_scipy_0_12" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
14 </package>
15 <package name="matplotlib" version="1.2.1">
16 <repository changeset_revision="c888aa8ed318" name="package_matplotlib_1_2" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
17 </package>
18
19 <package name="scikit_learn" version="0.13.1">
20 <install version="1.0">
21 <actions>
22 <action type="download_by_url">https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.13.1.tar.gz</action>
23 <action type="set_environment_for_install">
24 <repository changeset_revision="25dc49b0d6d5" name="package_atlas_3_10" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
25 <package name="atlas" version="3.10.1" />
26 </repository>
27 <repository changeset_revision="a6b8f46acca7" name="package_lapack_3_4" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
28 <package name="lapack" version="3.4.2" />
29 </repository>
30 <repository changeset_revision="ad6ebe2c75ef" name="package_numpy_1_7" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
31 <package name="numpy" version="1.7.1" />
32 </repository>
33 <repository changeset_revision="e4f395310680" name="package_scipy_0_12" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
34 <package name="scipy" version="0.12.0" />
35 </repository>
36 <repository changeset_revision="c888aa8ed318" name="package_matplotlib_1_2" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
37 <package name="matplotlib" version="1.2.1" />
38 </repository>
39 </action>
40
41 <action type="make_directory">$INSTALL_DIR/lib/python</action>
42 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
43 export BLAS=$LAPACK_LIB_DIR/libblas.a &amp;&amp;
44 export LAPACK=$LAPACK_LIB_DIR/liblapack.a &amp;&amp;
45 export ATLAS=$ATLAS_LIB_DIR/libatlas.a &amp;&amp;
46 export PATH=$PATH:$PATH_NUMPY &amp;&amp;
47 export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY:$PYTHONPATH_SCIPY:$PYTHONPATH_MATPLOTLIB &amp;&amp;
48
49 python setup.py install --home $INSTALL_DIR</action>
50 <action type="set_environment">
51 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
52 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
53 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
54 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
55 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
56 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
57 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
58
59 <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR/lib/python</environment_variable>
60 </action>
61 </actions>
62 </install>
63 <readme>Compiling scikit-learn requires a C compiler (typically gcc). The PYTHONPATH for scikit-learn can be accessed through PYTHONPATH_SCIKIT_LEARN.</readme>
64 </package>
65 </tool_dependency>