Mercurial > repos > iuc > package_rpy2_2_7_5

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:37:03 -0500
parents 97dcc17a6566
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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1 <?xml version="1.0"?>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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2 <tool_dependency>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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3 <package name="R" version="3.2.1">
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f562671a6557 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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4 <repository changeset_revision="228e68b52582" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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5 </package>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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6 <package name="readline" version="6.2">
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f562671a6557 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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7 <repository changeset_revision="1007a3015bdb" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
iuc
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8 </package>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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9 <package name="rpy2" version="2.7.5">
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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10 <install version="1.0">
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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11 <actions>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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12 <action sha256sum="0d88f7fff21fbef523c8678ed8f850a36052edca4ce702c62f234fdcb52de441" type="download_by_url">
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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13 https://depot.galaxyproject.org/software/rpy2/rpy2_2.7.5_src_all.tar.gz
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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14 </action>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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15
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97dcc17a6566 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit dee9be504effc4f7ccc6b0372bb5d1fa3a5b8a99
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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17 <action type="set_environment_for_install">
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f562671a6557 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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18 <repository changeset_revision="1007a3015bdb" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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19 <package name="readline" version="6.2" />
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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20 </repository>
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f562671a6557 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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21 <repository changeset_revision="228e68b52582" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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22 <package name="R" version="3.2.1" />
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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23 </repository>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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24 </action>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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26 <action type="make_directory">$INSTALL_DIR/lib/python</action>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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27 <action type="shell_command">
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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28 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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29 export LDFLAGS="-L$READLINE_LIB_PATH -lreadline" &amp;&amp;
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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30 export CPPFLAGS="-I$READLINE_INCLUDE_PATH" &amp;&amp;
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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31 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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32 </action>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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33 <action type="set_environment">
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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34 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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35 </action>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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36 </actions>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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37 </install>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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38 <readme>rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to R, a proposed high-level interface, including wrappers to graphical libraries, as well as R-like structures and functions.
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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39 http://rpy.sourceforge.net/rpy2.html
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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40 </readme>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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41 </package>
97b9362f0492 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_7_5 commit d05e18d58eae218575d477c7cc34877aeb3108ab
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42 </tool_dependency>