Mercurial > repos > iuc > package_rdkit_2012_12

comparison tool_dependencies.xml @ 8:e23fb57aa1e4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rdkit_2012_12 commit 97a064489364118d108b0dd2cfb4d9bc53080837
author iuc
date Thu, 19 Nov 2015 14:19:58 -0500
parents a70c850ae452
children 13c76dc5682d
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7:a70c850ae452 8:e23fb57aa1e4
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="numpy" version="1.7.1"> 3 <package name="numpy" version="1.7.1">
4 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="boost" version="1.53.0"> 6 <package name="boost" version="1.55.0">
7 <repository changeset_revision="16a53e6bd1a1" name="package_boost_1_53" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="214c7835ee91" name="package_boost_1_55" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 9
10 <package name="rdkit" version="2012_12_1"> 10 <package name="rdkit" version="2012_12_1">
11 <install version="1.0"> 11 <install version="1.0">
12 <actions> 12 <actions>
16 <!-- populate the environment variables from the dependend repos --> 16 <!-- populate the environment variables from the dependend repos -->
17 <action type="set_environment_for_install"> 17 <action type="set_environment_for_install">
18 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 18 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
19 <package name="numpy" version="1.7.1" /> 19 <package name="numpy" version="1.7.1" />
20 </repository> 20 </repository>
21 <repository changeset_revision="16a53e6bd1a1" name="package_boost_1_53" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 21 <repository changeset_revision="214c7835ee91" name="package_boost_1_55" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
22 <package name="boost" version="1.53.0" /> 22 <package name="boost" version="1.55.0" />
23 </repository> 23 </repository>
24 </action> 24 </action>
25 25
26 <!-- PYTHONPATH_NUMPY is set in the numpy package --> 26 <!-- PYTHONPATH_NUMPY is set in the numpy package -->
27 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:`pwd`/lib/ &amp;&amp; 27 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:`pwd`/lib/ &amp;&amp;