Mercurial > repos > iuc > package_raxml_8_2_4

comparison tool_dependencies.xml @ 0:3a587f1903d3 draft

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planemo upload commit baa6a1ec8b3c440cdf73409ccaafcd303e9f4e72
author iuc
date Mon, 30 Nov 2015 21:43:14 -0500
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children 1cb38f33917b
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-1:000000000000 0:3a587f1903d3
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="raxml" version="8.2.4">
4 <install version="1.0">
5 <actions>
6 <!-- Download source code -->
7 <action type="download_by_url" target_filename="standard-RAxML-8.2.4.tar.gz" sha256sum="e9fa4b3fe790094d832a640edc2b448890237dca0012d509d95be4cd4ef3d83b">https://github.com/stamatak/standard-RAxML/archive/v8.2.4.tar.gz</action>
8
9 <!-- Build raxml -->
10 <action type="shell_command">make -f Makefile.PTHREADS.gcc</action>
11 <action type="shell_command">make -f Makefile.gcc</action>
12 <!-- Install raxml -->
13 <action type="move_file">
14 <source>raxmlHPC-PTHREADS</source>
15 <destination>$INSTALL_DIR/bin</destination>
16 </action>
17 <action type="move_file">
18 <source>raxmlHPC</source>
19 <destination>$INSTALL_DIR/bin</destination>
20 </action>
21
22 <!-- Set environment for dependent repositories -->
23 <action type="set_environment">
24 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
25 </action>
26 </actions>
27 </install>
28 </package>
29 </tool_dependency>