Mercurial > repos > iuc > package_r_3_2_1

diff tool_dependencies.xml @ 8:81696eaad923 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_2_1 commit 533504857402146c837690aa731e4d6b9a8e14cb-dirty
author iuc
date Tue, 10 Nov 2015 06:35:39 -0500
parents 6bed0c9acc5e
children 918315e51bd5
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line diff
--- a/tool_dependencies.xml	Tue Nov 10 06:26:35 2015 -0500
+++ b/tool_dependencies.xml	Tue Nov 10 06:35:39 2015 -0500
@@ -21,9 +21,9 @@
                         LGF_VERS=`objdump -p $LGF_CANON | grep GFORTRAN_1 | sed -r 's/.*GFORTRAN_1\.([0-9])+/\1/' | sort -n | tail -1` &&
                         if [ $LGF_VERS -gt $BUNDLED_LGF_VERS ]; then
                             cp -p $BUNDLED_LGF_CANON ${BUNDLED_LGF_CANON}.bundled &&
-                            cp -p $BUNDLED_LGF_FQSO ${BUNDLED_LGF_FQSO}.bundled &&
+                            mv $BUNDLED_LGF_FQSO ${BUNDLED_LGF_FQSO}.bundled &&
                             cp -p $LGF_CANON $BUNDLED_LGF_CANON &&
-                            cp -p $BUNDLED_LGF_CANON BUNDLED_LGF_FQSO
+                            ln -s $BUNDLED_LGF_CANON $BUNDLED_LGF_FQSO
                         fi
                     </action>
                     <action type="set_environment">