Mercurial > repos > iuc > package_r_3_1_1

comparison tool_dependencies.xml @ 4:a3a99aa3ce01 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_1_1 commit ade7dfd3c1f1c5369e338013c5ca2ec7115cafe6
author iuc
date Wed, 06 Jan 2016 14:32:06 -0500
parents e2fb38782bf5
children
comparison
equal deleted inserted replaced
3:e2fb38782bf5 4:a3a99aa3ce01
8 </package> 8 </package>
9 <package name="cairo" version="1.12.14"> 9 <package name="cairo" version="1.12.14">
10 <repository changeset_revision="8f011e7388e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="8f011e7388e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="pixman" version="0.32.4"> 12 <package name="pixman" version="0.32.4">
13 <repository changeset_revision="bcf53d429118" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="7056a708062b" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="freetype" version="2.5.2"> 15 <package name="freetype" version="2.5.2">
16 <repository changeset_revision="34ebf47e4941" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 16 <repository changeset_revision="34ebf47e4941" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
17 </package> 17 </package>
18 <package name="ncurses" version="5.9"> 18 <package name="ncurses" version="5.9">
19 <repository changeset_revision="47ad4d7ba9fe" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 19 <repository changeset_revision="47ad4d7ba9fe" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
20 </package>
21 <package name="fontconfig" version="2.11.1">
22 <repository changeset_revision="4b8a90926882" name="package_fontconfig_2_11_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
20 </package> 23 </package>
21 <package name="R" version="3.1.1"> 24 <package name="R" version="3.1.1">
22 <install version="1.0"> 25 <install version="1.0">
23 <actions> 26 <actions>
24 <action type="download_by_url">http://cran.rstudio.com/src/base/R-3/R-3.1.1.tar.gz</action> 27 <action type="download_by_url">http://cran.rstudio.com/src/base/R-3/R-3.1.1.tar.gz</action>
30 <package name="libpng" version="1.6.7" /> 33 <package name="libpng" version="1.6.7" />
31 </repository> 34 </repository>
32 <repository changeset_revision="8f011e7388e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 35 <repository changeset_revision="8f011e7388e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
33 <package name="cairo" version="1.12.14" /> 36 <package name="cairo" version="1.12.14" />
34 </repository> 37 </repository>
35 <repository changeset_revision="bcf53d429118" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="7056a708062b" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
36 <package name="pixman" version="0.32.4" /> 39 <package name="pixman" version="0.32.4" />
37 </repository> 40 </repository>
38 <repository changeset_revision="34ebf47e4941" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="34ebf47e4941" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
39 <package name="freetype" version="2.5.2" /> 42 <package name="freetype" version="2.5.2" />
40 </repository> 43 </repository>
41 <repository changeset_revision="47ad4d7ba9fe" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 44 <repository changeset_revision="47ad4d7ba9fe" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
42 <package name="ncurses" version="5.9" /> 45 <package name="ncurses" version="5.9" />
46 </repository>
47 <repository changeset_revision="4b8a90926882" name="package_fontconfig_2_11_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
48 <package name="fontconfig" version="2.11.1" />
43 </repository> 49 </repository>
44 </action> 50 </action>
45 <action type="autoconf">--with-tcltk --with-blas --with-lapack --with-readline --with-cairo --with-libpng --without-x --without-aqua --enable-R-shlib --disable-R-framework --libdir=$INSTALL_DIR/lib</action> 51 <action type="autoconf">--with-tcltk --with-blas --with-lapack --with-readline --with-cairo --with-libpng --without-x --without-aqua --enable-R-shlib --disable-R-framework --libdir=$INSTALL_DIR/lib</action>
46 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action> 52 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action>
47 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action> 53 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action>