Mercurial > repos > iuc > package_python_2_7_scikit_learn_0_15
comparison tool_dependencies.xml @ 1:134585210cb5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_scikit_learn_0_15 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
| author | iuc |
|---|---|
| date | Sun, 17 May 2015 16:40:02 -0400 |
| parents | 088ad9f80c9d |
| children | 5b23df7cfbda |
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| 0:088ad9f80c9d | 1:134585210cb5 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="python" version="2.7"> | 3 <package name="python" version="2.7"> |
| 4 <repository changeset_revision="3f2a853e2ef5" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="55bebb0e06ec" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="numpy" version="1.9"> | 6 <package name="numpy" version="1.9"> |
| 7 <repository changeset_revision="a095a5975d3a" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="1b7d6172a358" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 8 </package> | 8 </package> |
| 9 <package name="scipy" version="0.14"> | 9 <package name="scipy" version="0.14"> |
| 10 <repository changeset_revision="8d22fd5a704c" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 10 <repository changeset_revision="b24af010d80a" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 11 </package> | 11 </package> |
| 12 <package name="matplotlib" version="1.4"> | 12 <package name="matplotlib" version="1.4"> |
| 13 <repository changeset_revision="652ee3afbd12" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 13 <repository changeset_revision="652ee3afbd12" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 14 </package> | 14 </package> |
| 15 <package name="scikit_learn" version="0.15"> | 15 <package name="scikit_learn" version="0.15"> |
| 16 <install version="1.0"> | 16 <install version="1.0"> |
| 17 <actions> | 17 <actions> |
| 18 <action type="set_environment_for_install"> | 18 <action type="setup_python_environment"> |
| 19 <repository changeset_revision="a095a5975d3a" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 19 <repository changeset_revision="55bebb0e06ec" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 20 <package name="python" version="2.7" /> | |
| 21 </repository> | |
| 22 <repository changeset_revision="1b7d6172a358" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 20 <package name="numpy" version="1.9" /> | 23 <package name="numpy" version="1.9" /> |
| 21 </repository> | 24 </repository> |
| 22 <repository changeset_revision="8d22fd5a704c" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 25 <repository changeset_revision="b24af010d80a" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 23 <package name="scipy" version="0.14" /> | 26 <package name="scipy" version="0.14" /> |
| 24 </repository> | 27 </repository> |
| 25 <repository changeset_revision="652ee3afbd12" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 28 <repository changeset_revision="652ee3afbd12" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 26 <package name="matplotlib" version="1.4" /> | 29 <package name="matplotlib" version="1.4" /> |
| 27 </repository> | 30 </repository> |
| 28 </action> | |
| 29 | |
| 30 <action type="setup_python_environment"> | |
| 31 <repository changeset_revision="3f2a853e2ef5" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 32 <package name="python" version="2.7" /> | |
| 33 </repository> | |
| 34 | |
| 35 <!-- allow downloading and installing an Python package from https://pypi.org/ --> | 31 <!-- allow downloading and installing an Python package from https://pypi.org/ --> |
| 36 <package>https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5=d9822ad0238e17b382a3c756ea94fe0d</package> | 32 <package>https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5=d9822ad0238e17b382a3c756ea94fe0d</package> |
| 37 </action> | 33 </action> |
| 38 | 34 |
| 39 <action type="set_environment"> | 35 <action type="set_environment"> |
| 40 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> | 36 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> |
| 41 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | 37 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> |
| 42 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> | 38 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> |
| 43 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> | 39 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> |
| 44 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable> | 40 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable> |
| 45 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable> | 41 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable> |
| 46 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable> | 42 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable> |
| 47 <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR/lib/python</environment_variable> | 43 <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR</environment_variable> |
| 48 </action> | 44 </action> |
| 49 </actions> | 45 </actions> |
| 50 </install> | 46 </install> |
| 51 <readme> | 47 <readme> |
| 52 Compiling scikit-learn requires a C compiler (typically gcc). | 48 Compiling scikit-learn requires a C compiler (typically gcc). |
