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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pyprophet_0_13_2 commit ceaef1a06c8600f9a042fc8f80f5b3fae75d4445-dirty
author galaxyp
date Sat, 30 May 2015 05:29:53 -0400
parents a8f192b553b0
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="numpy" version="1.9">
       <repository changeset_revision="75990fbcd389" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="pandas" version="0.16">
       <repository changeset_revision="b813a0daa0d6" name="package_python_2_7_pandas_0_16" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="scipy" version="0.14">
       <repository changeset_revision="eaf37c2ff694" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="scikit_learn" version="0.15">
       <repository changeset_revision="94b03784ec7e" name="package_python_2_7_scikit_learn_0_15" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="python" version="2.7">
        <repository changeset_revision="92611fea803c" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="pyprophet" version="0.13.2">
        <install version="1.0">
            <actions>
                <action type="setup_python_environment">
                   <repository changeset_revision="92611fea803c" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                       <package name="python" version="2.7" />
                   </repository>
                   <repository changeset_revision="b813a0daa0d6" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="pandas" version="0.16" />
                    </repository>
                    <repository changeset_revision="75990fbcd389" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="numpy" version="1.9" />
                    </repository>
                    <repository changeset_revision="94b03784ec7e" name="package_python_2_7_scikit_learn_0_15" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="scikit_learn" version="0.15" />
                    </repository>
                    <repository changeset_revision="eaf37c2ff694" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="scipy" version="0.14" />
                    </repository>
                    <!-- allow downloading and installing an Python package from https://pypi.org/ -->
                    <package>https://pypi.python.org/packages/source/n/numexpr/numexpr-2.4.tar.gz</package>
                    <package>https://pypi.python.org/packages/source/p/pyprophet/pyprophet-0.13.3.tar.gz#md5=81d29bec7f2dfe0367274aab31d7c733</package>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
                    <environment_variable action="set_to" name="PYPROPHET_ROOT">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>Compiling pyprophet requires a C compiler (typically gcc).</readme>
    </package>
</tool_dependency>