Mercurial > repos > iuc > package_python_2_7_numpy_1_9
comparison tool_dependencies.xml @ 0:a095a5975d3a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
| author | iuc |
|---|---|
| date | Sun, 17 May 2015 14:48:16 -0400 |
| parents | |
| children | 1b7d6172a358 |
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| -1:000000000000 | 0:a095a5975d3a |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="atlas" version="3.10.2"> | |
| 4 <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 <package name="python" version="2.7"> | |
| 7 <repository changeset_revision="3f2a853e2ef5" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 8 </package> | |
| 9 <package name="numpy" version="1.9"> | |
| 10 <install version="1.0"> | |
| 11 <actions> | |
| 12 <action type="set_environment_for_install"> | |
| 13 <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 14 <package name="atlas" version="3.10.2" /> | |
| 15 </repository> | |
| 16 </action> | |
| 17 <action type="setup_python_environment"> | |
| 18 <repository changeset_revision="3f2a853e2ef5" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 19 <package name="python" version="2.7" /> | |
| 20 </repository> | |
| 21 <!-- allow downloading and installing an Python package from https://pypi.org/ --> | |
| 22 <package>https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz</package> | |
| 23 </action> | |
| 24 <action type="set_environment"> | |
| 25 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> | |
| 26 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | |
| 27 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable> | |
| 28 <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable> | |
| 29 <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable> | |
| 30 <environment_variable action="set_to" name="NUMPY_ROOT_DIR">$INSTALL_DIR</environment_variable> | |
| 31 </action> | |
| 32 </actions> | |
| 33 </install> | |
| 34 <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme> | |
| 35 </package> | |
| 36 </tool_dependency> |