Mercurial > repos > iuc > package_python_2_7_gffutils_0_8

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:30:51 -0500
parents f5376ac25028
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bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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1 <?xml version="1.0"?>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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2 <tool_dependency>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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3 <package name="python" version="2.7.10">
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72c3d12f78a7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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4 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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5 </package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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6 <package name="gffutils" version="0.8">
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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7 <install version="1.0">
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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8 <actions>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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9 <action type="setup_python_environment">
6
72c3d12f78a7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
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10 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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11 <package name="python" version="2.7.10" />
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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12 </repository>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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13 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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14 <package>https://pypi.python.org/packages/source/s/six/six-1.9.0.tar.gz#md5=476881ef4012262dfc8adc645ee786c4</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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15 <package>https://pypi.python.org/packages/source/a/argh/argh-0.26.1.tar.gz</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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16 <package>https://pypi.python.org/packages/source/a/argcomplete/argcomplete-0.8.9.tar.gz#md5=02861a1bd74943edc48741c06e125b6a</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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17 <package>https://pypi.python.org/packages/source/s/simplejson/simplejson-3.7.3.tar.gz</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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18 <package>https://github.com/mdshw5/pyfaidx/archive/v0.4.1.1.tar.gz</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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19 <package>https://pypi.python.org/packages/source/g/gffutils/gffutils-0.8.4rc1.tar.gz#md5=9d46b3dfac35ad812df2448f20c5e8cc</package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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20 </action>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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21 <action type="set_environment">
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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24 <environment_variable action="set_to" name="GFFUTILS_ROOT_DIR">$INSTALL_DIR</environment_variable>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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25 </action>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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26 </actions>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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27 </install>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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28 <readme> GFF and GTF file manipulation and interconversion.</readme>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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29 </package>
bfddf2a473eb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
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30 </tool_dependency>