Mercurial > repos > iuc > package_python_2_7_deeptools_1_5_11

comparison tool_dependencies.xml @ 1:9c4e01c148b8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_11 commit cc066b7c430f28671ebb42052fa2eb086492904f-dirty
author iuc
date Tue, 22 Sep 2015 06:21:42 -0400
parents 30c958a8db0e
children 0eaccc10220c
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0:30c958a8db0e 1:9c4e01c148b8
5 </package> 5 </package>
6 <package name="numpy" version="1.9"> 6 <package name="numpy" version="1.9">
7 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="matplotlib" version="1.4"> 9 <package name="matplotlib" version="1.4">
10 <repository changeset_revision="345685d467fb" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="d46d42522eef" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="scipy" version="0.14"> 12 <package name="scipy" version="0.14">
13 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="pysam" version="0.8.3"> 15 <package name="pysam" version="0.8.3">
38 <package name="bx-python" version="0.7.2" /> 38 <package name="bx-python" version="0.7.2" />
39 </repository> 39 </repository>
40 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 40 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
41 <package name="numpy" version="1.9" /> 41 <package name="numpy" version="1.9" />
42 </repository> 42 </repository>
43 <repository changeset_revision="345685d467fb" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 43 <repository changeset_revision="d46d42522eef" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
44 <package name="matplotlib" version="1.4" /> 44 <package name="matplotlib" version="1.4" />
45 </repository> 45 </repository>
46 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 46 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
47 <package name="scipy" version="0.14" /> 47 <package name="scipy" version="0.14" />
48 </repository> 48 </repository>
77 <!-- include pysam --> 77 <!-- include pysam -->
78 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_PYSAM]</environment_variable> 78 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_PYSAM]</environment_variable>
79 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_PYSAM]</environment_variable> 79 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_PYSAM]</environment_variable>
80 <!-- include ucsc tools --> 80 <!-- include ucsc tools -->
81 <environment_variable action="prepend_to" name="PATH">$ENV[UCSC_TOOLS_ROOT_PATH]</environment_variable> 81 <environment_variable action="prepend_to" name="PATH">$ENV[UCSC_TOOLS_ROOT_PATH]</environment_variable>
82 <!-- libpng lib path -->
83 <environment_variable action="set_to" name="LIBPNG_LIB_PATH">$ENV[LIBPNG_LIB_PATH]</environment_variable>
84 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[LIBPNG_LIB_PATH]</environment_variable>
82 <!-- disable the config file of deepTools --> 85 <!-- disable the config file of deepTools -->
83 <environment_variable action="set_to" name="DEEP_TOOLS_NO_CONFIG">TRUE</environment_variable> 86 <environment_variable action="set_to" name="DEEP_TOOLS_NO_CONFIG">TRUE</environment_variable>
84 </action> 87 </action>
85 </actions> 88 </actions>
86 </install> 89 </install>