Mercurial > repos > iuc > package_python_2_7_bx_python_0_7

view tool_dependencies.xml @ 27:ed5fdaba090a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 999fd0b109aae24b72ce5791b7965941e9b2a19a
author iuc
date Thu, 17 Sep 2015 16:13:12 -0400
parents cd7bec234cb5
children 78c115f001ee
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<?xml version="1.0"?>
<tool_dependency>
    <package name="numpy" version="1.9">
        <repository changeset_revision="507f3ab4e38d" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="python" version="2.7.10">
        <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="bx-python" version="0.7.2">
        <install version="1.0">
            <actions>
                <action type="setup_python_environment">
                   <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                       <package name="python" version="2.7.10" />
                   </repository>
                    <repository changeset_revision="507f3ab4e38d" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="numpy" version="1.9" />
                    </repository>
                    <!-- allow downloading and installing an Python package from https://pypi.org/ -->
                    <package>https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.2.tar.gz</package>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable action="set_to" name="BX_PYTHON_ROOT_DIR">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="PYTHONPATH_BX_PYTHON">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="PATH_BX_PYTHON">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH.
        </readme>
    </package>
</tool_dependency>