Mercurial > repos > iuc > package_python_2_7_bwameth_0_2_0

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bwameth_0_2_0 commit e912b80a0a6a556922a73037843600bd9de687db
author iuc
date Wed, 14 Sep 2016 16:47:16 -0400
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-1:000000000000 0:fd470f9ef129
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="python" version="2.7.10">
4 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="bwa" version="0.7.12">
7 <repository changeset_revision="67aa12c8d449" name="package_bwa_0_7_12" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="samtools" version="1.2">
10 <repository changeset_revision="5b7172f9b230" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package>
12 <package name="toolshed" version="0.4.6">
13 <repository changeset_revision="fbf045f6d12d" name="package_python_2_7_toolshed_0_4_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package>
15 <package name="bwameth" version="0.2.0">
16 <install version="1.0">
17 <actions>
18 <action type="setup_python_environment">
19 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
20 <package name="python" version="2.7.10" />
21 </repository>
22 <repository changeset_revision="fbf045f6d12d" name="package_python_2_7_toolshed_0_4_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
23 <package name="toolshed" version="0.4.6" />
24 </repository>
25 <package md5sum="7d6e2ed375da0fc3d44de3477aa5c087">https://depot.galaxyproject.org/software/bwameth/bwameth_0.2.0_src_all.tar.gz</package>
26 </action>
27 <action type="set_environment">
28 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
29 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
30 </action>
31 </actions>
32 </install>
33 <readme>
34 Installation of toolshed from Brent Pedersen
35 https://github.com/brentp/toolshed
36 </readme>
37 </package>
38 </tool_dependency>